| Id Trinity | FTRINITY_DN52832_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_235736 |
| Sequence | AAATAAATGACGATAAATAATTCTGACAATTAAAATATTTAAAAATGAAATAGAAATTTTCCTTTAGGTTTCTTTGTTCATCATCTCGAAAATTCTCACG ACTCTTCCCATTCCTTGTTCTTCTGCTTCTTCCTATCTATACGCATATTTATATCTTTAATCTTTCTTATATTATTATATTATATATTCAAATTATATTC ATATCTATAATATTTGTATCAACGTTAAAATAAACTAAATTCAAATTCGAAAGAGAGAGAGAGAGGGAGAGATGGGTCCAAACGGTGGTTCAGCGGCGGC GAAACAGGCGGAGCGGTTGAGAATAGACGGCAACACTTACTTCACCAAACAACGTTTTGGTGCTGCCATTGATGCTTACACCGAGGCAATTACGCTATGC CCAAATGTTCCGGTGTATTGGACGAATCGCGCCTTGTGCCATCTTAAACGCAATAATTGGGAGAGAGTCGAAGAAGATTGTCGGAAAGCAATTCAGTTGG ACAGCAAGTTGGTTAAGGCCCACTATATGTTGGGACTTGCATTGCTAAATCGAGAGGAATATGCCAAGGGAATCAGAGAGTTGCAGAAGGCTTTGGATCT TGGAAGAGGTGCCGATCCCAAGGGATATATGGTAGAAGAAATATGGCAAGAGCTTGCAAAAGCAAAATACCTAGAGTGGGAACGTTCATCGTCCAAGCGA TCCTGGGAATTGCAGAGCTTAAAGTATGTTTTCCTCGTGATTTTCAGACCAATCATCTGAGAGTTATTGATTAATGATCGGTGATAGGTTGACCCTATCA TATTTTTTATTAGTTGCTTCATCTTTCTGGCGAGCGAATATTAGTTAAAAGCTCCAATATTATCTTATTTTTCGTTAATGTTTCAGAGAAGTTTGTGAGT CTGCTCTAAAGGAAAAACATTTTCTTGATGTGCCGGAAATGGAAGGATTTGTAGAGGTTACCCCTACCCATATGGAAGAATTAGAGGCTTTAGGAAAGGT CTTCAATAAAGCTGCAGAGGATGATATACCAACTGAGATACCAGATTATCTCTGCTGCAAAATTACACTTGATATTTTTCATGATCCGGTAATCACTCCG AGCGGACATACATATGAGAGGGCAGTGATTATTGAGCATCTGAAGAAGGTTGGTAAGTTTGACCCCTTCACGCGACAACCACTTCAACTATCGCAGCTAG TACCGAACTTGGCTATTAAAGAAGCGGTGCAGGCATTTTTGGACAAACATGGCTGGGCCTACAAGGTAGATTAATTTACAAGTTAACAAATGCAGTAGGA TGCTGTATTTCGTAAATGAGGCCGTAAGTGAGGCCGTGTTCGGTAACTCGTTAATTATGTTTTCCCCTGCATTGTTTTGATTTTGGACATGAGTCCTTAT TATGAAGTGTACATATTGTTTTCATTGTCCTAAGTAAATAGTTGTCTACTCCATTATGTGATGCTGTGTATAGAAAATGCAATGCTGCTAAAGAGAGTTT GGAAATGATTAGTAAGAAATGTATTCACACACATTAGACAAATCATTATGCTAACTTGGCTTCTCTATCAGATTAAGATATAAGGTTAGTTGTTGAATGT TAAGCACTTTGGTTGTGAAGTATGAATTGGAATATTCATGTTATGCAGAAAAATTAATTACTTTTGTAATGGACACATTGATTGAACTTCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28449; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235736
| Blastp | E3 ubiquitin-protein ligase CHIP from Arabidopsis with 70.63% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase CHIP from Arabidopsis with 70.63% of identity |
| Eggnog | STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase(ENOG410ZC2R) |
| Kegg | Link to kegg annotations (AT3G07370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463758.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |