Id Trinity | FTRINITY_DN52839_c0_g3_i3 |
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Name Transcript | Ll_transcript_235313 |
Sequence | ATAGAGTTTAAGATTGATATACTGTCTGTGTAAAGTTTTTTATACTAACAACACATCATCCACCGTTTATTTAAATTACTTTAATTTGAAAGTCAATAAT ATGAATGGTAATGATATATGATATATTGACAGTGTAAAGTGTCGCATAATACTATATAATAACTATCAATGGGAGTGCCGCATTATATTTGTACTGCACT GTGATAGCACAGTGAGAGTGGCATGCCCTAGAATCTGCACACAACCTGTTTGTTGAAAAGTCTCTCTTAACAATGGAGCATCGAAGGTTACAACAATTAA CCAAAATCACTATCAACGACAAGAAATTCATACAAACCGCTCTCCTCTCCGACCTCCGTGTTGACGGCCGCCGCCCTCTGGACTACCGCAAACTCACCGT CAAATTTGGCAGAGACGACGGTTCCGCCGAGGTAAAGCTCGGCGATACCTACGTCATCTCCTTCGTCACCGCTCAACTTCTTCAGCCCTACAAAGACCGT CCCAATGAAGGCAGCCTCTCCGTCTTCACCGAGTTCTCTCCCATGGCCGATCCTTCCTTCGAACCCGGCCGCGCTTCCGAGTCTGCGGTCGAGCTGGGAA GGATCGTGGACCGTGGGTTGAGGGAGAGTAGGGCGATTGATACAGAATCTCTGTGTGTTGTGGCAGGGAAGTTGGTTTGGGCGATTAGGATTGATATACA TGTGATTGATAATGGTGGTAATTTAGTTGATGCTGCTAATGTTGCTGCTTTGGCTGCTTTGTTAACTTTTCGGAGACCCGAGTGCTCGTTGACCGGAGAA GATGGTCAGCAAGTTGTGGTGCACCCTCCTGAGGAGCGTGATCCACTTCCTTTGATTATACACCATCTTCCTATAGCTGTCACCTTTGGGTTTTTCAGCA ATGAAAATCTTGTGGTATGGATTTTTTATATTTTTATTTCTCACTAATAATGCATCGCATTCTTGAGCTTGGTTCTGTAGAGGAGGTCCTCTCTGATTTT GTAT BLAST |
Tissue | flowers |
Gene name | LI_gene_28501; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235313
Blastp | Exosome complex component RRP45B from Arabidopsis with 73.46% of identity |
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Blastx | Exosome complex component RRP45B from Arabidopsis with 73.46% of identity |
Eggnog | Exosome complex(COG2123) |
Kegg | Link to kegg annotations (AT3G60500) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421238.1) |
Pfam | 3' exoribonuclease family, domain 1 (PF01138.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |