| Id Trinity | FTRINITY_DN52839_c0_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_235315 |
| Sequence | CTTGAAATGACCATTATACCCTCAGTGATTTTTGACGTTCACATTTGTACATACCTAAACCGAAGCTCGAATATTTAATTCAGATACCCGAACCCAATCA TATTGGGTTTTCTCCATTAAATTCAGACAGGTATCTACATGTTCGGAATTTAGCCTTGAAATGACCGTTATACCCGTAGTGATTTTCAGCTAAACCCTGT AGTGAAAGTAGTGAATGAGATAAACCCTAGAAGGTGCAATGGAGCATCAGAAGTTACAGCAACTAACCAGAATCACAATCAACAACAAATCTTTCATCCA AAATGCTCTTCTCTCCGACCACCGTCTCGACGGGCGGCGCCCCTTCGACTACCGCAAACTCACCATCAAATTCGGCACAGACGACGGCTCCTCGGCGGTG CAACTTGGCCAAACCCACGTCATCTCCTTCGTCACCGCCCAACTCCTCCAGCCCTATAAAGACCGTCCTAACGAAGGTAGCCTCTCTGTTTTCACCGAGT TCTCGCCCATGGCTGATCCTTCATTCGAACCTGGTCGCTCGAGCGAATCTGCTGTTGAGTTAGGACGTGTCGTTGATCGAGGGTTGAGGGAGAGCAGGGC TATTGATACGGAATCGTTGTGTGTTGTTGCTGGGAAAATGGTTTGGGCGATTAGGATTGATATTCATGTTGTTGATAATGGTGGTAATTTAGTTGATGCT GCTAATGTTGCTGCTTTGGCTGCTTTGTTAACTTTTCGGAGACCCGAGTGCTCGTTGACCGGAGAAGATGGTCAGCAAGTTGTGGTGCACCCTCCTGAGG AGCGTGATCCACTTCCTTTGATTATACACCATCTTCCTATAGCTGTCACCTTTGGGTTTTTCAGCAATGAAAATCTTGTGGTGATTGACCCAACATACCA CGAAGAGTCTGTAATGACTGGACGAATGACTGCTACTCTTAATGCAAATGGGGATGTTTGTTCCATTCAGAAGGCTGGAGGTGAAGGAGTCTCGCAGCGG GTTATCATGCATTGCTTAAAACTTGCTCATGTTAAAGCTGGTGATATTACAGCGAAGATAAGGGACGCAGTAGAAATACACAACACAGAAAGGGCACTAC GGAAAATTAAACGCCACACTTCGTCTGTTGCTGTTGATGTTTGTGGTACCACTGCCACGTTAGGGGGAAAACAAAATCAATCAGTGGATGATAAGAATGT TAATCATTTAGACCAGTTGAAGCTGAAAGATGAGGTAAATGATATGGAATGTGATGCCAAGACACCAGGACAAGTACAAAGCAACAAGAGGGATGGAGTC TCAAATAATTTCATTGGTGGTCCATCAAGTTGGGATCCCTACTCAGAACGTGTGGATTCAGATTCTCTAAAAGCTTCTCTAGCCTCACGTGGACAGTTGA CTCCTCATAGTAAACAAAACGATCCAAGGAGTGAGACTAAGAGGGAGGAACAACCGAAGGAAGTTAAAACAAATTCTTCTTCGGCGATGGACATTGCTCC AAATGTAGGGCAGAGTAATGAAGGGAAAACTCTGAAGGATGCTGTGAAGCCCAAGCACAAGAGAAAGAAAAAAGCATCTTCCAATGGTAGGAATTAACCA GTGAGGGGATAGACAGGATGTTGTAAGAATAGGATGGACATGGACTCATGTTTTTTGTGCCAAAAAGTAATTCTCCATACTTAAGTTTTTTATTTGCTGA TTTTTTTGTATTTTTTTCAGCCTGACAAGGTTATCTTTCTTTCCCTTGTTCCTCATGGTTGGTTGGTTATTAATGACTACTTCACTTAACAGAGAAACTT TTAAATTGCTGAATCTGGACTACTTCACTTAAGGGCCATTTCCATGGTATTAGTAATCTGTACTGTCTAATTTATATCTTATATTTGGAACCATGGTGAT TCCTAAGTTTAATACACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28501; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235315
| Blastp | Exosome complex component RRP45B from Arabidopsis with 61.92% of identity |
|---|---|
| Blastx | Exosome complex component RRP45B from Arabidopsis with 61.92% of identity |
| Eggnog | Exosome complex(COG2123) |
| Kegg | Link to kegg annotations (AT3G60500) |
| CantataDB | Link to cantataDB annotations (CNT0002300) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421238.1) |
| Pfam | 3' exoribonuclease family, domain 1 (PF01138.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |