Id Trinity | FTRINITY_DN52848_c0_g2_i2 |
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Name Transcript | Ll_transcript_235098 |
Sequence | ATTTGAGTATATTATTACCAAAATACATTACATTAAAATGTGATTGAATGCATGTATTTTAAGTTCACAGAACTCTTCTTCTAAGCCTCGTTGATTCACT TTCTCTCCCATCTCCTTCTCTTCTCTCTGCCTCAAAAGTCATAAACTGGAATAAAATTATAAAGAGCCAAAACTCCAAACACCTTTTTCAATATTTCACA AACATGCCCACTCCTTCGTCTTCATCTTCATCTTCTTCCTCTATTTGGGTACTCTCAAACATAAAGCTTCAATTCTTTGCCCGTATCAGAAGGTTTCTTC AATCCAAAGCAACCCGAAAGCGCGGGTGCGAGCCCTCTGATCAATTTGCTAAAGAAAAGAGCATAGTTGAGCACAAAAACAGGGTTGAAAACATTGAAGA AGTTCATGTTATGGGGGAGGAGAAATCTGAAATGAAGTTGCAAAGGAGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTAGCAGCAAAG GAGATTGAAAGGTTAGCTAAAGAAGATGTGAAAGTTAGAAAGTTGATAACAGGACTTGGGGTGGTGCCAGTGTTGGTGTCTATGGTGGCGTCTGAGGTGG CTAGCCGCCGGAGAGCAGGGTTGACGGCGTTGATCCACCTAGCTGATGGAACCTACACGAACAAGGCTTTGATGGTGGAAGCAGGAATATTATCCAACCT ACCAAAGAAAATTGACCTTTTAGATGAATCAACAATAAGTGCATTTTCAGAGTTGCTCTTATCATTATCATATCTATCAAACACCCAATTCTCTTTTCCT TCATTAGACTTTCTCCCATTACTTACACACATTCTTCAGTCAAACTCAAGTTTTGATACCAAAAGATCATGTTTGTGTGCCTTATACAACATCTCAACTG TGTTAGAGAATGCAAACCTTTTAGTTTCTAGTGGGTTTGTACCTATGCTCTTGGAAATGTCCACAATGAAGGAAATTTCAGAGAAAGCACTTGCTACTAT TGGAAACATGATGGTGACTTTGATGGGAAAGAAAACAATAGAGAATAGCTCAATGGTGCCAGAAAATTTTATTAAGATCTTGTCATGGGAAGATAAACCA AAATGCCAAGAGTTATCAGTTTATATTTTGATGATTCTGGCTCATCAAAGCTCATCACAGAGAGAGAAAATGGCACAGGCTGGGATTGTTCCTGCACTTC TTGAAGTGGTTCTATTGGGTAGTTCTTTGGGTCAGAAGAGAGCAATGAAATTATTGCAATGGTTTAAGGATGAAAGGAGAGTAAAAATGGGGCCACATTC AGGTCCACAAACACCAAGATTTGCAATGGGCTCACCTTTAAATGAAGGAGATGCAATAGAAGGGAAGAAAATGATGAAAAGTTTGATGAAACAAAGCTTG ATTAGGAATATGGAAATAATAATGCAGAGAGCAAATGCAACTGGAGACTCTTCTAAACTGAAGTCATTGGTGATCAGCACAAGCTCTAAGAGTTTGACTT ACTAAGTGCTACTACTTTCATACTCACAGAAAAGGGGAAACATCAAAATGAATTATGGATGTAACTACAGCATTATCTTCACTTTCTCTTTTTTTTAAAC TTCACTGAGTTGATAATTGCAACAATATTTTCATGTTCTTTCAATCTTAATTGTAATATCTTTTCACATTTAATCAGAAACAAATCAAATTGGTTTGTTG TTGCACGATTATCAGGATCCTAAATGTAGTCTGTTATTCCTAAAATCATGTCATGAACATAACTTTAGGAAAAAGTTACACTGGAAGCTAATCCTAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_28552; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235098
Blastp | U-box domain-containing protein 7 from Arabidopsis with 30.23% of identity |
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Blastx | U-box domain-containing protein 7 from Arabidopsis with 28.81% of identity |
Eggnog | Ubox domain-containing protein(ENOG410XQ5K) |
Kegg | Link to kegg annotations (AT1G67530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426228.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |