| Id Trinity | FTRINITY_DN52858_c6_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_234484 |
| Sequence | GAGACATAATGGGGGAAAGGAAATAAACGTGCAACAAAAGTTGGTGTTTTTGCTTGGATTGATTTTGCATAAGAGGGCAATTGAGGCATCAGAAAAGGAG AGGGCTACTCCGGATATTAGGACCGGAGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAGAGAAGGTTATCCATCTATAAAGGTATTGTTATCT CAAGACAGAACTCTGGCATTCACACAACTATTCGAATCCGAAGAATTATCGCCGGTGTTGGGGTTGAGATAGTCTTCCCAGTGTAAGTTTCCTCCTTTTT GGAACTTAATATTTAGAGACTGTTCATGTCATTTGTACTAGTCAATGTTTCTTTTGGCTGTGTTTCTGTGTACGCAATTGTTATAGTGGGATATATAAGC TTGAAAGAGAGACAGAAATTTGGGGTTAATATTGCTTTCTTCATTTTCACTTCATGTTTAAGTGGCATTACATCATTAAAAACATGATATCATTTGGGGG AGAGGGGAAATTAAGTCAACTACTACCACGTATAATACCTATATTATGTTGTTGACAATGTGCTACTACTGGTAATTGTGCACCTTTTGAAAGCTCAAAT TGTTTAGAAATTGGTTGAGGACTAGGAGGACTCAAGCTAACCTTGTTCTAGAATCCGTACGCATCTCAGATTGTTACAAATTTGGATTCACTTATTTCCA TTTCAGTGTTGTAACTTGTAAGAAAATTAGAAAAGCATCTCCTCTACCATTCTGTAATGTTGGGAAGCCAACCTGAATCTGAACTCTGAAAATATCTCTC CTCTCTTTAAGTATGGAGGGTGAGATTTCCGTATATGTTTCAAGGTGTAACCTGATAAAAGCAATGTTTGTCTGCATAATTCTTGTCTTAAGTCTATGTT GTATAATAAAAATTTATGAAATCAATATTAAGATTGAAATTTATTTATCAAAGTAGCCAAATGCTTCACTCATTATGTTACTGATTGATGGTTAAGATCA AAGTATTTTTCATATCCCTCTGCTATGATGCTTATTTTCCCTGCCACAGTTACTCACCAAACATCAAAGAAATCAAAGTAGTGAACCACCGCAAGGTCCG GAGAGCAAGATTGTACTATCTACGCCACAAGCTTCCCAGACTCTCCACTTTCAAATGAGATGCCAGTGACCCACTTTTCATCTTTGAAATGGTATGCTGA AGTGTCAGAAGTGATTGCAGAGCCATATTTTGATTTCTTTTTTCATTTTGCTGTGTTGTAAAATATGTAAGTTTTCTTCACTTTAATTTATTCTCCTGAA ATGGAAACAAGTGTAGTTGCCCTTCATAAACTTGAGAAATTCTTCTGCATTATTATTATTACACGGTAGAAAGCCAAGTTCTGAAGAAAAGTACATGCTA ATATTGCCATGTCCGAAAGGGATTATGGAGAACTTATTTGGCTTTATCATATACACATGTAAGCAAGTTTTTTTGGGAGAGATTATGAATATAAATGCTT TTTATTTGATGTCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28660; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_234484
| Blastp | - |
|---|---|
| Blastx | 50S ribosomal protein L19-1, chloroplastic from Arabidopsis with 82.43% of identity |
| Eggnog | This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity)(COG0335) |
| Kegg | Link to kegg annotations (AT4G17560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421814.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |