Ll_transcript_234486

• Id Trinity: FTRINITY_DN52858_c6_g3_i1
• Name Transcript: Ll_transcript_234486
• Sequence: GAGAAAGTTGAGGCCCAAGAAAGGTGAAATTGGCGAAACGGATAAGTGTGATTACTTCATCGTTGTGGCTGGTGCTGTTCTCTTCTTCCTCATATGCTGA TGGCTTCTTCCCAACTCCTTCTTCAGCAGTTTGCGATACCACAATACTCCAACCTATGTTCCCCTCCCATTGCGAAGTTGAGTTTTGTATCCTCTTGTAG CACCTCTCGCAACATTCCCTTCACCTCAATTTCATGGAGTCACAGTGTTCAAAAACATAAGCCTCATTTTGTAGTTAGAGCTGAGTCTCAACCCCAAGAA ACTACCGAAAATGTTGAAGAAGAAGAAGAAGAAAAAGAAGATCTGAAAGTGAAGAGATGGAGTGCGTATTCGGATTGGTAGGGAATGGATTCGCGATAGT TGTAGCTGACACATCTGCTGTTAATTCTATCTTAGTCCACAAATCCAACGAAGACAAGATCATGTTCCTTGATTCTCACAAACTCATCGCCGCTAGCGGT GAACCCGGTGACAGGGTTCAATTCACCGAGTATATACAGAAGAACGTTGCGTTGTATCACTTCCGCAATGGCATCCCTTTGACCACCGCCGCCGCCGCCA ATTTCACCCGCGGTGAGCTCGCCACCGCTCTCCGTAAGAATCCATACTCCGTGAATGTCCTTCTCGCTGGTTACGACAAGGAGACTGGCCCTTCACTCTA CTACATTGACTACATTGCAACACTTCACAAGCTTGAAAAGGGAGCTTTTGGTTATGGCTCCTATTTTTCGCTGTCATTGATGGACAGGCACTTCCATAGT GGAATGTCGGTGGAAGAGGCAGTTGATCTCGTAGATAAGTGCATTCTGGAAATTAGATCAAGGTTGGTTGTGGCACCTCCAAACTACGTGATCAAAATTG TTGACAAGGATGGGGCAAGAGAGTATGCTTGGCGCCAGTCCGTTAAGGACACTCCCGCTCCCACAGCTTAAAAATAACTATGTTCCTTGTCTTTGATTGA ACTTATCTAAATTTGCCCATTATCTTTTATCTTTTCACTTGCTCTTACTGTGGTCTCTCTGAAAATCATGGTCTCTAAATGCTTGAAAGTAAGACAGTTT GTGTTTTGAATTTATATGTATGATGATTAGTTCTATTCAGAAGTAGCATTGTGACAATTTATGAGGCTTGCCTGATTTTAGTCCACCCCAAGTTGGGAAT TCTGAAAATTGGAGAAATAGATAAAGTGCTTGAAATAATACAGGACTTATGAACTGTTAAATGACCCGGTGAAAATTGGGAGGATCATTGATGAGGTTGC TGATTTCATGTGCCTTAAATATGATACAAATCCAATTAGATCTTTCCTAACGTTATAGTTACTATGCCTTAATACGCCCCAAGATCTGGATTCATCTTTC CTCTCAAGTTAATTTTGTTGTAAGTTTAAAATCTGAATAATGTTATATCTTCCTACTAATCCTCTTGTCCACAAAAAAAGTGACAAATGTCATTTGTAAA CCAATTATTAATAACTAAAGTATCATTTTGTGACACATGTAATATTTTTGTATATAAG
• Tissue: flowers
• Gene name: LI_gene_28661;
• Additional information: details;

Expression of Ll_transcript_234486

FPKM

• FPAB: 47.2
• FPNAB: 61.5
• LF1: 53.6
• LF2: 49.9
• LF3: 47.7
• LF4: 63.2
• UF1: 59.7
• UF2: 58.5
• UF3: 60.5
• UF4: 71.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_234486

• Blastp: Proteasome subunit beta type-2-A from Arabidopsis with 87.88% of identity
• Blastx: Proteasome subunit beta type-2-A from Arabidopsis with 87.88% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(COG0638)
• Kegg: Link to kegg annotations (AT3G22630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444570.1)
• Pfam: Proteasome subunit (PF00227.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;