Id Trinity | FTRINITY_DN52860_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_234400 |
Sequence | CTTCGGCTCTGAAGACGCCATGATTCGGCTTGACATGAGTGAATTTATGGAAAGACATACAGTCTCCAAACTCATCGGTTCTCCTCCTGGATATGTTGGT TACACCGAGGGTGGTCAACTGACTGAGGCAGTTCGGCGTCGTCCCTATACTGTTGTACTCTTTGATGAGATTGAAAAAGCCCATCCTGATGTATTCAACA TGATGCTTCAGATCCTGGAAGATGGAAGACTAACAGACAGTAAGGGAAGAACTGTGGACTTCAAGAACACACTTCTTATAATGACATCAAACATTGGAAG CAGTGTGATAGAGAAGGGAGGTCGTAAAATAGGATTTGACCTTGATTATGATGAGAAGGATAGCAGTTATAACCGAATCAAAAGTTTGGTGACTGAGGAG CTAAAGCAATACTTTAGACCAGAGTTTTTGAATAGATTGGATGAAATGATTGTTTTCAGGCAACTCACTAAACTGGAGGTGAAAGAGATAGCAGACATTA TGCTGAAGGAGGTGTTTGAGAGATTGAAAACAAAAGAGATTGAGCTTTCAGTGACAGAGAGATTTAGGGAAAGAGTGGTTGATGAAGGTTATAATCCTAG TTATGGAGCTAGGCCTCTAAGAAGAGCCATAATGCGGCTTTTGGAGGATAGCATGGCTGAGAAGATGCTTGCTAGAGAGATTAAAGAGGGTGACTCAGGT ATAGTGGATGCTGATTCTGATGGCAATGTGATTGTGCTTAATGGGAGCAGCGGTGCACCAGATTCACTGCCAGAGGCTCTTTCTGTCTAACGTGTTTGTC TTTTGCTATGTTTGGACATAAAGCTTTTAATCATTTATTAGTCCCAAGCATGTTTGCCCATATAGCTAACAAAGCAAGTAGATAAATGGTGGGGAGAATG ATAAACGGGGCTGTCTTTCTCATACATTGGATAGCGTGAATCAATGAACAATTGCAATGAAAGCAGGTTATTTTGAAGTTCAATACTGGTAGACCAATGT AATGTTATTCGTGGCCATGACATACTTTAATATAATTGTATGGTTTGATTTTTACTCGAGATCATAATATATCTAATCGCATATAGTTGTCATACAATGG CGTACTCTTGCAAGGCAACATGCCTCTTTTTTGGGGGACTTTAACTTAATTCTCAAATGCAAGTTTTTTATTGAAATTGATGCATTCTCCCAATGGAAAG GGTGAGTTTTTTTAGCAGCACTCCATTCATTTATCATTTCCCCAGGGAATTTTTTGGTATCATTCTGTAACAGGTTTCCATGAGCTGTTTTAAGTGCACT TTGCTGCGGAATAAAAAATGGGATGGTTCCAATCGTTGAA BLAST |
Tissue | flowers |
Gene name | LI_gene_28676; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_234400
Blastp | Chaperone protein ClpC, chloroplastic from Pisum with 95.42% of identity |
---|---|
Blastx | Chaperone protein ClpC, chloroplastic from Pisum with 95.42% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463459.1) |
Pfam | AAA domain (Cdc48 subfamily) (PF07724.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |