| Id Trinity | FTRINITY_DN52866_c4_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_235000 |
| Sequence | AAAGGTTACTCATTAAATATTACATCTTTGGAGATGTAAATTTTACCATTGGAAGAGAGACATTTATACCCTTTTTGATGAAGAGAGTACCCAAGGAAAA TACATTCAGTGGATTTGAGACTGAGTTTGTGCTGATTGTATGGTCTAAGTAAAGGATAACATGCACAACCAAAGGTTTTGAGAAATTGATAATCAGGAAG TTGATTAAACAAGAGTTGATAAGGAGATTTGTGATGAAGGTTAGGTGAGGGTAATCTATTTATAAGAAACACTGCAGTGAGGAAAGCATGGTCCCAGAAT TGCATAGGTAGGTGAGCATGGCTTAGTAATGTAAGACCAGTCTCAACTATATGCCTATGCTTTCTTTCAACAATTCCATGTTGATGATGTGTATGAGGAC AGGCTATCTTATCCACAATACCAAGGGAAGCTAAGAATTTACTAAAGGGACGAAATTCACCCCCAAAATCACTCTGTACAACATGAACAGAGTGATTAAA TTGAGTATGGATATATTTGAGGAAATACTGAAACATAGTAAGAGTTTCAGATTTCAGTTTGAGAAGAAAAATCCATGTATGCTTGGTAAAAACATCAACA ATGGATAGATAATATCTAAACCCCGTTGCAGAATGCAGAGGTGCAGGGCCCCATAAGTCAACATAGACTAGGGCAAAGGGAGTGTTATAAACAGTTGTTG ATTTTGGAGCATACCGTTTGTGTGATTTACCCATACAACATGAGGAACAAAAACCAAAAACTGTTTTATTGATATGGGGAATATTACATTGAGTAAGAAT AGTTTTTACAATTGCCTCATGTGGATGGCCTAACCTAAAATGCCACAAGGAAAAAACTGAAACAGAACTAGATGTATTGTGATGACCTATATTAGGTTTA TTACAAGTAGTAGTAATAGGAACAGACAAACCAATAGGATTGGTGCTAGTATGAGTCAGAGAAGTAGAAGACTTGGAGAACTCAGTGGTAGGACACAGAC CATGAAAGGTGTAAAGGCCTTCCTTGGTGACTGACCCACTCAGTAAGACCTCTTTAGTAACCTGAGATTTCACAAAGCAAACATTAGCATGAAATTCAAA GTAACATGAATTGTCACGGGCAAATTGTGAAACACTTAACAGATTCTTTGTAATAGAAGGTACTAAAAGAAGATTGTTAAGAGACATGGTTAGATTAGCC TTAGTATTTGAAGGAAGGAAAGAATTGCCAACAGATGCAATTGAAATACCAGTTTCATTACCCATGTATATTTGTTCATGACCAAATGTTTCTGCAGGAC CATGAAGAAGAGATGCATCAACAGTGAGATGATTAGTTGCACTAGAATCTGGATACCAGGTTACATGTTTTGAATCACGAGGTGTAGGAGCACAATCTTT GATTCCAGTTTGAGCATTCATAACATGAGGTTGAGAGGATACTTGTGGCCATATGATGGTCATGGTCCCAGCAAAGAGTCATTGTTGGAAGGATGAGGAT ATCCATGATGTCCAGTGTGAAAATCAGTTGGATAATCTGGATAGAAATGAGCTGGATATGTGGAAGATCCAAAATCAGATTGATGATAGTTGTAGTGTAA GAGGGGAGGTTGACGTTGCACTGAAGGAGAGGTCATAGGAGGTGCGCCATAATGAGGAGATGCATAACATCATGACCATTTCTCTTACAATAGATGCAGT ACAAATGTGATGAGCGTCCAAAGGATCTACCACCACGATAGCGACCAGTGAAGTTGCCTTTACGTCCACGATTGTTACCACGATACTGTGGAGAGCCTCC GTAGTTGGTGAGATGAGGTTGAGATTGAGGTGTTGGTTTAGGAGAAAAGTATGTTGGAGGAATGATGGAAGAAGGACGAGTTTGTGGAGAAGTGTCTTGT TGAGAGGAGTATGAAGGAGAATTGGAGGCAACATTGACAGAAAGAGCATCAAAGAGAGCTCTGTGTTTGTTCTTTTCAAGTCTGGATTCATAGGTAAGCA GAAAGGATTCCAGATTGTGAATAGTAGGAGATTCAATTTGACTCTCAATGGAGGTGATAACTGGTTGGAACTCTTCATTTAATCCATCCAGTATATAGTC AATGTGCTCTGAGTTTGAAATTGACATTCCAATGAAGATCAACGCATCAATGAGACTCTTGATCTTCGTAAAATATTCAGAAATGGAAGACGAACCTTGT GAAATAGACCAAAGTTGTCGACTATGAGCTTTGGTCTGTGAGTTGCAATAGGAGTCAAGCTCCTCCCAAAGTTGCCAAGAATGCACACAACTTACAACAC GAGGTTGTAAATTCTCAGAGAGTGAATTTAGGATCCATGAGAACACTGATTGATCAACTTCTTCCCATCGTAGATATGCTGGATTCACATGATTGATGAG ACGATCATCTTCATCGAGAAATCGATGAGGAATATCAGTGCCAAACACGAATCGATTTGCACAATTCGAAGTTAGGGTTGCAAGCATGAAATGACGCCAA ACGAGGTAGTTCTTCTCAGTAAGCTTCATCAAAGGAACCGGAAGAATTAACGGCGATGAAATCGCCTGAATCGGCGATGCAGCGGAAGGAGTGAATGGTG GGGAAGACGGACAGGTACCAGTATTGGTGGTGGTGTTGGTAGTAGCCATGGCGTGATACCATGTAAGAAGAGAGAAATCGAAGGAGAAGAAGAATATTGT AGAAGGTTAGAGAGAAGAGAAAAGAGAGAGCCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28719; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235000
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 28.19% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 28.51% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447442.1) |
| Pfam | GAG-pre-integrase domain (PF13976.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |