| Id Trinity | FTRINITY_DN52866_c4_g6_i2 |
|---|---|
| Name Transcript | Ll_transcript_235004 |
| Sequence | CTTGTATCTTGGTCCAAACTTGGTCACTTGGTGGTCTAAAAAGCAGCAAACCATATCAAGATCCAGCACAGAAGCAGAATATAGAAGTTTGGCTCTAGCC TCTCAAGAGTTAATGTGGATTGAATCCCTTCTCAAAGAGCTCAAGATTTCCTACCAAACTCCAACTATTTTCTGTGATAACATGAGTACTATTGCTATGT CACACAACCCAGTTCTGCACAACAGAACCAAACACATAGAGCTTGATCTTTATTTTGTCAGAGATAAAATTCAAGACAAAACTCTTAATGTCCAACATGT TCCTTCAACTTTTCAGACAGCTGACATTCTAACTAAGCCTCTTCCTACAAATCAGTTCATTGCCTTGAGGAATCAACTCAAAGTTCTAGATATTACTTCT GCAAGCACTAAACTCTAGTTTTCTGGAGAACCCTCCAATTCACGGGGGTATATTAGAGTATTATAATATTTGTATTCTGTTAGCAAATAAATATCTAGTT TAGTTTAGAATATTCAGTTGCACTGTTGCAACTGAATCTGTTCAAGCATTTAGTCACGTGGCACTTATTGTAGTCACACCTTGCTTGCTGACTCAGTGCC TATATATTCACTTCTTGTATCTTTACCAAATACAACAAGAATCATCAAATTCAAATATTCTCTCTGACTCTCTCTCTCTCTTCGTTTTCTGTTTTCACTT CTTCTCTTCTTTATCTCTTTCACTATTTCTCTACATTTTACATGGTATCACGCCATGGCTACCAACAACAACACCAACACTGGTACCTGTCCTTCTTCTC CACCCTTCTCACCCTCCGTTGCGTCACCAATTCAAGCTGTATCATCACCTCTTGCTCTTCATGTTCCTTCGATCAAACTCACAGAAAAGAACTACCTCGT GTGGCGACATTTCATGCTTGCAACCCTAACCTCAAATCGCGCCAATCGATTTGTTTAGGCACAGAAATTCCACACCGTTTTCTCTGACGATGATCGTCTC ATCAATCAAGTCAATCCAGCGTACTTACGTTGGGAAGAACTTGATCAATCCATCTTCTCATGGATTATGAATTCTCTCTCTAAGAGTTTACAACCTAGGG TTGTTGGTTGCATTCATTCGTGGCAACTTTGGGAAGAACTGGATTCATATTGTAATTCTCAAACAAAAGCTCGTAGTAGGCAACTCAGATCTCAATTACG CTCTATTTCACAAGGTTCTTCCACTATCTCTGAGTATTTCACCAAGATCAAAGGATTAGTTGATGCCTTGATCTTCATTGGAACACCAATTTCCAGTTCA GAACACATTGATTACATTCTTGATGGATTGAATGAGGAATTTCAACCAGTCATTACCTCTATAGAAAGTCAAATTGATCATCCAACTATTCACAATCTGG AATCATTCCTTCTTACATACGAATCACGACTTGAGAAAAACAAGCACAAAGCCCTATCTGATGCTCTTTCTGTTAATCTTACCACTGATTCACCTTCGTA TACTTCACAACCTGTTAATTCACCTCAGCCTCGTCCTACTTCTCACATTCCTCCATCCTACTACTCTCCAAAGACAGAACAACATCCTACTCATCATCTC ACTGGTTATGTTCATCACTATCGTGGCAACAATAGAACACGTCGTGGCAACTACAATGGCAGACAACGTGGTGGCAGAATGTATGGAAGATCTCCTTCCT TTTGCATCTATTGCAAACGTCCTGGTCATGATGTTAGCAATTGCTACTATACTCCTTCCACTTTTGGTGCTCCACCATCATACAATGCTCCTCATTATCA CTCAGCACCACACAATTCACATCCTCTTCACTACAACTCTTCCTCATCCAGGTTTCCTGCTCATTTTTACCCTGACTATCCAATGGATTTCAACACTGGT GCTCACTCTCTTCCTCACACTGATTCGCTTCTTGGTCCTGGACCACTTTCTGGTCCCAAACATCATCATCCACCATATGTCATGAGTGCTCAAACTGGAC CACATAAGTCAACTCATCCTCACCGTGATTCAAGACCTGTGACTTGGTATCCAGACTCTGGAGCTACGAATCATCTCACTGCTGATGCCTCTTTGGTTCA TGATCCTGCTGAAACTTTCAGTCATGACCAGATCTACATGGGTAACGGTTCTGGAATTCCAATTCATTCTGTTGGCACTTCTGTTTTTACTTCCCATATT AATCCTAACATCTCTCTAACACTCAAAAATCTTTTACTGGTTCCCTCTATCACAAAAAATCTTCTAAGTGTGTCTCAGTTTGCAAGGGATAACTCATGTT ACTTTGAATTCCATGCTAATGCCTGTTTTGTAAAATCTCAGGTTACTAATGAAGTCATTCTTCGTGGGACAGTCACCAAGGAAGGACTATAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28721; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235004
| Blastp | - |
|---|---|
| Blastx | Copia protein from Sophophora with 39.2% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447442.1) |
| Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
| Rfam | - |
| GO | - |