| Id Trinity | FTRINITY_DN52872_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_233793 |
| Sequence | GCATATTGCAGAGTTACAGTGTGAATTATTTTGTAATTAAAAAACTATTTTTGAATTCGATGTGGCTTGATGCTATCCAAATGTGGTTACGCTGTGGCTG ATGCAGCCGCATCAGTTTGCGGCAGTAACTGCAACCACAATATTGTGTTGCGGCCACAATTTAAATCACTGGGGACAAGTTATAGTCGACAAACAATATA AAACACGTTGAATCTCTATGATATAGTTGTTGTGATTGGATGCAGAGTTGAAGAAATCTTTGGTGGCTGTTTTCTCTCAGTTTGGGAAGATTCTAGAAGT TTTAGCTTTCAAGACTCTCAAGCACAAAGGTCAAGCTTGGGTGGTGTTTGAGAATGTGTCTTCTGCTTCTGATGCCATTAGGCAAATGCAAGGTTTCCCT TTCTATGATAAGCCCATGGGTCTCGAAGATAAATTTCATCTTTTGTCGGCCCCAAGGGAAATTTTTTCACAATAGTTCATGCAATAAGTGCTAACACAAG ATATAATAGCCACCAAATTAGTGCTCAAAGAAAATGGCCGCCAAATTAGTCCTCAAAGGAAATGGCCATTAAATAAGCCCCTGACAGTTAATATGGCCAC CACTTAGTGTAAATTTCAGTCCCTAAAAGATTCACATGGCCAACAAACAACTTCCTATAAGGACCAATGTGGTGGTGATTTTAAACTGTTGGAACTTATT TGGTCGGCATTTTCTTTGGAGGTCTAACTTGGTGGTCATTGTATCTTTGGTGGATCAAAGTGACTTTTTTACTCTAGATCTTATATTAGTGTAGCACAAA ACAGTGTTTTACATTTTATGTGATGCATGGCCTGACTCCATTATATGGCATTAGGAAATTGACAAAATTATAATTTCTACCTGAGTGATCGAAAACTAAG CAAATGGCTGTTTAGCTTTTTCTGCTAAAACCATGGTTGCTCACTTTTCCTGTTTGTGCTTTACTTGAATTGGCGTAACCTGTCATATGACTTGGTAGTC TTATGGAGCATGGGCTAGAACCAGTATTTTATGTATCTTCCTCATTGTACTAGGTTGCTCGAAATTACTTATATCTAAACTGCATATGTACACACTTCTC CTACTGGACATTTTTTTGGGTATATTCTCCTGGTGGACATTTGCTAATCCCTAGCAGAAATATTTCCATAAAATTCCCTTTAACACGTCTAATTTGTCTC AGGCGAAAATACAATTCTTTTATTGCTTAATCAAATAAAAATGTTGAAATAATTTATCAGGAGAAATGAATTCTATTATATTCACACCTCTCTTTTGTGT TTTTTTAATAGGGATACTCTTTTATTTTCTTTTTGGAAAAGGGAACAGATTGGCTCTGATAACTTGCGGTTTATTTATGTCAGTGCAGTAGAACTTACAA GAAATTGAATTTGGCATTGTGATTTATGCAGAGAATACAGTATGCAAAGACTAAATCAGATGTAATAGCAAAGGCTGATGGTACTTTTGTTCCCAGGGAA AGACGGAAGAGGCATGATGACAAAGGCAAAAAACGGAAGGACCAGCATGATGCTAATTTAGCTGGAGTTGGCATAAATCCAGCTTATGCTGGTGCATATG GTGCAACACCTGCTCTATCCCAGATACCCTATCCCGGAGGTGCAAAATTTATGGTACCCGAGGCCCCTGCTCCTCCAAATAATATACTCTTTATCCAGAA TCTTCCCAATGAAACAACACCGATGATGCTGCAAATGCTCTTTCTTCAATATCCTGGTTTCAAGGAAGTTAGAATGGTGGAAACAAAGCCCGGAATTGCG TTTGTCGAGTATGGAGACGAGATGCAATCCACGGTCGCAATGCAGGCACTACAAAGTTTCAAGATAACCCCACAGAACCCTATGTTGATAACTTATGCCA AGAAATAGATAGCAGATTCTTCAACATATGAAGGCCATGAATCATACATATCCTGAACATAGAGTTAGTCTAGATAGTGCAATGCTGTATATTCTTAAAT GGTGTTTAATATAAACAGCTTTGGATCTTGTATGATTGTAGTTAAGAGTAATAACTTTTGTGTTCTTATAAAAATATGTATTTGATAAATTAGAAACTAG TTCAAAAGGGTCTTTTAATAAGAGAAATGGTTAAAGAACCCAACAATACTTTGTATGGTAAGAGATGTATTTAATGAAGCAAGCGAATTTATAGTTCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28782; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_233793
| Blastp | U1 small nuclear ribonucleoprotein A from Arabidopsis with 74.53% of identity |
|---|---|
| Blastx | U1 small nuclear ribonucleoprotein A from Arabidopsis with 72.67% of identity |
| Eggnog | Small nuclear ribonucleoprotein(ENOG410XPZI) |
| Kegg | Link to kegg annotations (AT2G47580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465429.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |