Id Trinity | FTRINITY_DN52905_c0_g2_i2 |
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Name Transcript | Ll_transcript_106195 |
Sequence | AAGAAACTTTTGCATTAACCTCTCCATCTTTCTTCACTCCCTTCAAAGCATTACCTTCCCATGCTCTACTTTTATGACAGAAAATCCCCCAACAACCAAA CATAAAAAGCCCCCGAACAAACCAAACAACAAAGCCATCCAATCCATCTACTCATAATTCATTAGCACCACCATCATCCACATGGGTAGCTTTTGGATTT GGTGGATCATAGCTCTTATTCACATACTTCCATTTTTTGACTCAAAGCCTTTGATCCAAACCATTCAAGGCAGGACACCGCAATCCCCTGTTGAATGCAA CCAATCTGGTTGCACCCTCCAAAACTCTTATGGTGCTTGGGGAGACCGAAAAGACTGCTATGCCCTCAACATAACATACCCAACAACAGAAGAACAACTT CGTTTGGCTGTTTCACATGCTGTTCAAAACAACCTTAAAGTTAAGGTTGTCACAAAATTCTCACACACAATTCCAAAGCTAGCATGCCCAGAAGGAAAAA CAAACACTTTGCTAATCAGCACTGAAAAATATGACTCTGGCATCCAAATTGATGCTGCAAATTTAGCAGTCACTGCTGATTCAGGTGTGGGACTTCGTGC TTTGATTGATGCGGTGGAAAGTGCAGGGTTTAGTTTGGTGGCTGCACCTTATTGGGAGGGTGTTAGTGTTGGAGGGCTTATTAGTACTGGAGCACATGGT AGTTCTTGGTGGGGGAAAGGTGGGGCTGTTCATGATCATGTTCTTGGACTTAGAATTATTGTCCCTGCATCAGAATATGAAGGTTATGCCAAGATTTTAT GGTTGGAAGCACCAGATCCTCTCTTTAATGCAGCAAAAGTATCACTAGGAGTTTTGGGTGCCATTTCCAAGGTAAAGTTATCACTTGAGCATAGGTTCAA AAGAAGCATAACCTACAACTTCACTGATGATGCTTATATTGAAGATGTGTACATAAATCATGCAAAGCAGTATGAGTTTGCAGATATAACATGGTATCCA TCCAAACATACAGCTGTGTACAGATATGACTCCAGGGTTTCCTTAGATGCTTCAGGGGATGGAGTCTACGACTTTATTGGTTTTCAAGCGAACTCGATTT TGATATCTGAATCAGTTAGAGCAGCAGGTAATGATCTTTTCAACTGTACTTCCAAGTTCTAACGTTGTAGCTGCCATATTGTTCTTCTTCTTTGAGCCTA CAATATAACCAAGCTTAAAAAGTTTCAATGTATTCCATAAACATTGATATGCAGAGAAGTTGCTGGAAAATGCAAAAAGTGTGAATGGGAAATGCTTAAC AGCAGCTACTACTTTGGAATACAAGAAATTAGTGGGCAATGGATTGAAGAATAATGGCCTAATATTTAATGGCTACCCTGTAGTTGGTTATCAAGGCAAA ATGCAAACCTCGGGATCATGCTTATATTCGAGAAGATTTGATACTGCATGTGCTTGGGATCCAAGAATCAAAGGGTTGTTCTTCTATGAGAGTACAGCAA TCTTCCCTGCTTCCAGATTTGGAAACTTCATCCGCAATGTGAGGAAACTTAGAGACCTAAAGCCAGAAAATTTCTGTGGGGTGGACAACTATAACGGAAT TCTAATACGCTTCATCAAAGCCTCTGATGCATATCTAGGACAATCTGAAGACTCTGTAGTGATTGATTTCAACTATTATCGTGCAGATGACGCATTGACT CCTAGACTAAATGAGGATGTGTGGGAGGAAGTGGAGCAATTGGCATTCTTCAAGTGTGGGGCTAAGCCACATTGGGCAAAGAACAGGAACTTAGCATTTT TGGGGTTGCAACATAAGTATCCCATGTTTAACCAATTTATTGCAATAAAACACAAATTGGATCCGCAAAGTGTGTTCTCTAGTACATGGTCAGAAGAGAT ATTGTACGGGAAGGTGTCAGAAAATTTTGATGGGTGTGCTTTAGAGGGGCTATGTATATGTAGTGAGGACAGGCATTGCAGCCCACAAATGGGATACTAT TGTAGACAAGGCCTTGTCTACAAGGAAGCTAGAGTTTGTAGGTATTCATCATCCTCCATAGCAACAATCTCCATAGCATGATATGCGTTTTTATAGTGCA AAGCTTTATTCTTTGTGCTCGGAGCATATTCCTTCCTTTCAAATTATCGTTCCCCTAATAGTTTTAATGGTCTTAGAATAAATCCAGGATCTTGTCGATG TTTACATTAACAGATGCTTGCACTAGTTTATATGATTCCTTTATAATCATATTATTTTATTTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_29031; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106195
Blastp | L-gulonolactone oxidase 3 from Arabidopsis with 63.25% of identity |
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Blastx | L-gulonolactone oxidase 3 from Arabidopsis with 67.67% of identity |
Eggnog | FAD linked oxidase domain protein(COG0277) |
Kegg | Link to kegg annotations (AT5G11540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429823.1) |
Pfam | FAD binding domain (PF01565.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |