Ll_transcript_104702

• Id Trinity: FTRINITY_DN52906_c4_g2_i4
• Name Transcript: Ll_transcript_104702
• Sequence: TTTTAATTCTGAGTGTGTGTCGGGGTGTTGTAGAAGTTGAGCTCGGTTCTGTTCCCATTTCCCAATCGCAACAAATCCAAATCATGGATCAAAGCTAAAT CACACAAATGCTCTTCATCTTCGATTCCTTACACTATTCTCTGCAATTCTAGATCTATAAAACTTTGATTACAACAAATCTCAACAATAATTACAAGATG TATATGGCTTATGGTTGGCCTCAGGTTATTCCTCTTCAACAAGGACTTTGTCCTTCTCAACAACGGGTTGTGTTCCTCAAAAACGTTAATCGATTGTTAC TTATTGTTTCTCCTACTCATTTTGAACTATGGAGCACTTCTCAGCATAGAGTGAGATTGGGGAAGTACATGAGAGATTCAGATTCAGTGGAGAGGGAAGG AGAAAACTTGCAAGCTGTGTGGAGCCCCGATACCAAATTAATTGCCATTCTTACTTCTTCTTTCTTTCTTCACATTTTCAAAATCCAGTTTTCGGATAAA AGAATACACATTGGAGGAAAGCAACCCTCTGCTTTGTGCCTGGCTACTATTTCTCTTTTGCTTAGTGAGCAAGTTCCTTTCGCAGGAAAGGATTTGTCTG TGAGCAATATTGTTAGTGATAACAAACATATGTTGCTTGGACTTTCTGATGGAACTTTATACAGCATGTCTTGGAAGGGGGAGTTCTATGGGGCTTTTCA ATTTGATCCATATCCTCTTGCTAGTGTTGAAGATTCTCTATTACCACGTACTCTAGACAACGGTCTTTCTCCTAATAGTCAGCCAAAGATTCTTATGCCC AACCACATTATTCCTAATAAGTTTGAAATTAACCAACTGGAACTTTGCCTTCCATTGAGGTTGCTATTCGTCTTGTATTCCAACGGGCAACTTGTCTCAT GTTCCATTAGTAAGAAAGGTTTAAAGCAAGTTGACTATATTAAAGCAGAACAGAGGTTGGCTTGTGTTGATGCTGTATGTGCTTCAGTAGCTGTTGAACA GCAAATTCTTGCTGTTGGTAGCAGAAGAGGAACAGTTGACTTATTTGATTTGGCTGAATCAGTAACACTTATACGAACAGTCTCTTTGTATGATTGGGGG TACTCAGTGGATGACACTGGCCCTGTTAGTTGCATTGCTTGGACACCTGATAACTCTTCTTTTGCGGTTGGGTGGAAGTTAAGGGGGCTTACCGTTTGGT CTGTTTCTGGGTGTCGCCTGATGTCAACAATCCGACAAATAGGTTTAAGTTCTGCATCTTCTCCAATTGTTAAGCCAAACCATGATTGTAAGTATGAACC ATTGATGGGTGGTACCTCACTGATGCAGTGGGATGAATATGGATATAGACTTTATGCTATTGAGGAGGGATCTTCAGAGAGAATTCTTTCCTTCTCTTTT GGAAAATGCTGTCTTAGCAGAGGAGTTTCAGGAACTACGTACATCCGGCAAGTAATTTATGGGGAAGACCGATTACTCATCGTGCACTCAGAAGAGAGTG ATGAACTTAAAATGCTACATCTTAATCTTCCAGTTTCTTATATTTCTCATAACTGGCCTGTTCAGCATGTAGCGGCTAGCAAAGATGGGATGTACTTAGC TGTTGCTGGTCTCCATGGTTTGATATTGTATGATATTCGATTGAAAAAATGGAGAGTATTCGGAGATGTTACTCAGGAACAAAAGATTCAGTGTAAAGGG TTGTTATGGCTGGGGAAGATTGTCATCGTCTGCAACTATGTTGATTCTTCTGACACGTATGAGTTGCTCTTTTACCCAAGGTATCACCTTGATCAAAGCT CATTGCTCTGTCGTAAACCATTGCTCGCTAAACCAATGGTGATGGATGTATACCAAGATTATATACTGGTTACATATATGCCATTTGATATTCACATATT CCATCTGAAATTATTCGGTGAATTAACACCTTCAGGAAATCCAGATTTGCAGCTTTCTGCAGTCCGAGAACTTTCAATTATGACTGCAAAGAGCCATCCT GCAGCAATGCGGTTCATTCCTGACCAATTTCCAAGAAAATCTATTTCAAACAATTACATTTCACCCTCATCAGATTCATTTTCAAGGGAGCCAGCAAGAT GTTTGATATTGAGGGCAAATGGAGAGCTTTCACTTCTTGATTTGGATGATGGACGGGAGAGAACTCTTACAGATTCAGTTGAACTATTTTGGGTCACCTG TGGCCAGTGTGAGGATAAAACTAATTTGACCGAAGAAGTTTCATGGTTAGATTATGGTCACCGAGGCATGCAGGTTTGGTATCCATCTCCTGGTGCTAAT TCTTTTAAGCAGGAAGATTTCTTGCAGTTGGATCCAGAGCTGGAGTTTGATCGTGAAGTATACCCTTTGGGACTTCTTCCAAATGCTGGTGTAGTTGTTG GTGTTTCTCAAAGAATGTCATTTTCAGCAAGTGCAGAATTTCCATGCTTTGAGCCATCTCCTCAAGCACAAACAATATTGCACTGCCTACTACGGCATCT TCTTCAGAGGGACAAAATTGAGGAAGCTTTGAGGCTGGCAGAGCTATCAGCTGAGAAGCCTCATTTTTCACATTGTCTAGAGTGGCTTCTTTTTACAGTA TTTGAAGCAGATATATCCAGGCCAAATATGAATAAGAACCAGATCTCAATTCCTAATCATGCTAAAAGCACTCTTTTGGAGAAGACATGTGACCTGATCA GAAATTTTCCTGAGTACTTTGATGTTGTTGTAAGTGTCGCAAGAAAAACCGATGGTCGTCATTGGGCAGATTTGTTCTCAGCTGCTGGAAGATCGACAGA ATTGTTCGAGGAATGCTTTCAACGTAGATGGTATCGCACTGCAGCTTGCTATATACTTGTGATTGCTAAGCTCGAAGGACCTGCTGTCAGTCAGTACTGT GCTTTACGGTTATTACAGGCAACACTAGACGAATCGTTGTATGAGCTTGCTGGGGAGCTGGTGAGGTTCTTGCTAAGATCTGGTAGGGAATATGACCAAT CATTAACTGATTCAGATAAACTCTCTCCCAGATTTTTAGGCTATTTTCTTTTTCGTTCTAGTGATCGGAAGCAGCCATTGGATAGAAGCACCTCATTGAA GGAGCAAAGTGCTCATATTACATCGGTTAAGAATATTCTAGAAAACCATGCTAGTTTCCTGATGGCTGGGAAAGAGCTCTCCAAGCTTGTTGCATTTGTA AAAGGCACTCAGTTTGATTTAGTGGAGTATCTACAGCGTGAAAGATATGGGAGTGCTCGCCTGGAGAATTTTTCTTCAGGGCTTGAACTGATAAGCCAAA AGCTTCACATGGGAACTTTACAGAGCCGGTTGGATGCTGACTTTCTTCTGGCTCATATGTGCTCTGTCAAGTTTAAAGAATGGATTGTTGTCCTTGCTAC TCTATTGAGACGTTCTGAGGTTCTTTTTGACTTATTCCGCCACGATTTCCGGTTATGGAAAGCATATGGTACCACACTGCAGTCACACCCAGCATTTGCT GAATATCAAGATTTGCTAGAAGAACTGGAAGAGAAACTTTTGTCAGTTGCAAACATGGAACAAAAGTGAAAGTACATAATTCATTTGTGGACTGTTTGCA CACATTGGTTTGATGATATGCTTGAGTAAGTTTCACCTTGGCCCATACGAAGTTCCGGTAGCTCATGTCACACCTGAAGACCATGGTTCCTTTCCCTTTA ATTTGCATAATGGGACAAGAAACTACATTTATGTGATGCCTTACCATTATCTTCATGACTAATCATTTTATTGGTGCCAATCCAATCAAATGGGAATGGT ACATATAGATAGAGGTTAGTAAGTATGTGTAGACAAGCATATGCATCTGTGAGGGTTTCGTTATTCTTTTCTCGCTTTAGCCCTCATTTTGTAATGTGTT ATGTAAAAGCATCAACAAATCCATTTGTATATATCAATTATGCTCCTGGTCAGTTCAACATTCATAGTAGAATTTATGCAACTTGCTTTTCTCTACTGAG CAAGTTCAAGATTTATTGCTGTTTACTATTTTTGTCTTTGTAACCACTATTTTCATTGACAGTACTCTAACTAAAATGTTTACTTAATCCATTTTTCAGT TTAGGATCAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_29039;
• Additional information: details;

Expression of Ll_transcript_104702

FPKM

• FPAB: 6.9
• FPNAB: 7.4
• LF1: 8.1
• LF2: 7.3
• LF3: 6.7
• LF4: 3.9
• UF1: 4.5
• UF2: 7.7
• UF3: 6.4
• UF4: 3.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_104702

• Blastp: RAB6A-GEF complex partner protein 1 from Mus with 24.56% of identity
• Blastx: RAB6A-GEF complex partner protein 1 from Mus with 24.77% of identity
• Eggnog: protein RIC1 homolog(ENOG410XT5J)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003552406.1)
• Pfam: RIC1 (PF07064.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;