| Id Trinity | FTRINITY_DN52906_c4_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_104703 |
| Sequence | CTGCATTGAACATAATGCATAACATACTTTGTTGTTCCTTGATTCAGAAATCTCTTCCCTCTTAACATAAAAATAATGTAATTCAGTCCATCTGATGCAT TTTGTAGAAGTTTTGAGGCTTAAATAAATTTAGTAGTTGCAATTATAGTTATAAATAGGAAAAACCCCTACACAGGTCCCTTAAGTTATATTTAGGTTAA TATTCGAAATCCACCATTCCTATATTCTTGATCAGTTAATGTACTAATTTGGGCCTCAATTAATTTTTAGTTGGATCCAGAGCTGGAGTTTGATCGTGAA GTATACCCTTTGGGACTTCTTCCAAATGCTGGTGTAGTTGTTGGTGTTTCTCAAAGAATGTCATTTTCAGCAAGTGCAGAATTTCCATGCTTTGAGCCAT CTCCTCAAGCACAAACAATATTGCACTGCCTACTACGGCATCTTCTTCAGAGGGACAAAATTGAGGAAGCTTTGAGGCTGGCAGAGCTATCAGCTGAGAA GCCTCATTTTTCACATTGTCTAGAGTGGCTTCTTTTTACAGTATTTGAAGCAGATATATCCAGGCCAAATATGAATAAGAACCAGATCTCAATTCCTAAT CATGCTAAAAGCACTCTTTTGGAGAAGACATGTGACCTGATCAGAAATTTTCCTGAGTACTTTGATGTTGTTGTAAGTGTCGCAAGAAAAACCGATGGTC GTCATTGGGCAGATTTGTTCTCAGCTGCTGGAAGATCGACAGAATTGTTCGAGGAATGCTTTCAACGTAGATGGTATCGCACTGCAGCTTGCTATATACT TGTGATTGCTAAGCTCGAAGGACCTGCTGTCAGTCAGTACTGTGCTTTACGGTTATTACAGGCAACACTAGACGAATCGTTGTATGAGCTTGCTGGGGAG CTGGTGAGGTTCTTGCTAAGATCTGGTAGGGAATATGACCAATCATTAACTGATTCAGATAAACTCTCTCCCAGATTTTTAGGCTATTTTCTTTTTCGTT CTAGTGATCGGAAGCAGCCATTGGATAGAAGCACCTCATTGAAGGAGCAAAGTGCTCATATTACATCGGTTAAGAATATTCTAGAAAACCATGCTAGTTT CCTGATGGCTGGGAAAGAGCTCTCCAAGCTTGTTGCATTTGTAAAAGGCACTCAGTTTGATTTAGTGGAGTATCTACAGCGTGAAAGATATGGGAGTGCT CGCCTGGAGAATTTTTCTTCAGGGCTTGAACTGATAAGCCAAAAGGTTTGAAGTTTACATTTGGAAAAACAAACTTTCTGTGCTGACCTTTCTATGTATT TCATTGCTTTTTATTTGCTGTTGGTGGTGTTCAAAATAACCAGTTGAAGCAAACCACTCCAAAACTAAACTGCAGCATATAAAAAAAATCCGTTTTATTA ACACCAGATTTTTTAACCGAACCAGATTTACCTCTAAATGTAGTTCAGTTTGAATATCTAAATCAATGGTCATTTTTTTTCGTTAACCAAAGCTTGGCGC AACGGTAAGGTTGCTGCTTAGTGACCATGGGGTCACGAATTCAAATCCTGAAAATAGTCTACCTGCTTGCAAGGGTAAAAATACATACATTTACCCTCCC CAGACCCGAAACCATAGTAGGTAGGAGCCTTTTGCAGTGGGTCACCCTTTTAACTAAACCTTATTGTCAATCTCCGTTTTTACAAAAATCTTCATTTTTA CAATCACAATTTCTCTGTTCAAAGCTCTAACCTGAAATTAAGAGAACATAATCCTAGAACCCTAACATTTGTTTGCACAATTCTGAATGAGTCCATTGAA ATGCAAAATGTGTTCTATTCCAACTTAACTTTCAGAGATTGGGTTGCTACATATTACGAATTTAGAAGTGGGCCTAGTCCAAATATCGAAATGTAAAAGT GAGTTTAGTCTTCTTCCTTAGCAGGCTAAGTGAACAACAACATAAGTGCACTTTATCCCACATCTTGACTCAAAACTTTAAGGTATTAGTTTCATGAGTC TTTCCACCTTATGTTGTTCAACTTGTCTCCTTATATTCAATGTGAGACTTCTTTATTTGTTCCGATATTCCCCTTCAAGTTCAACTGGGTTGACTCAGTT GTGGCTTGTATATAATCTCTAGCCTGGGCTTGTATTGCAAGTTCTTAGAGCCTCAAAGGTCATCAGGTCGCCTTGGCTTGTACTTCCTTGACTTGAGTCT GGCCATAGGTCTGGGAATAATTGGTCCCTGGATTATCTGGGGTATGATACCATATTACAAATTTAGGACTGGACCCAATCCTCTAGAGATTTGAAAATGT CAATCTTCTGGGGTAGCATAGAGTGATTCACTTGAAAATGCATTTCTCTTGGGGGGACGAAAGGGTTCTTAATATTTTCAACCTCATTGGAGTCGGTGCG AATGAATTTGGGAGATCTGATGCCTTAAGGTTTTGGGTGAAGATGTAGTGTCAAACCCACTTATGTTGTTGTTCACTTAGCCCACTGTGAAGGAAAGCTA AACTCACTCCTGACATTCGACTTGGACAGGGCCCCACTCGTAAATTCATAATACTCTATGTGACTCCTCTGCCTTTTATGGGAGCAAAACATCAAAGAGA TGAAACTCCCCAATGGTTAGGTAGCATAAGCACTGGTGATGAAACTGGATTCTGAAATGGTTTACAATAATTGGTTTTTGAACAGGTTTGTAAGTGGGTC TGAGTTATTCCTTATTCTTCAAATAGAAACTTCTTTAGTTACCTGTTTCTTCCCTTTGTTCTCTCTTTCACTCTTTTATCTTTCTTTCGGCTAAGCATTA TCTCTTTTTCATCTTTTGTTGCAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29039; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104703
| Blastp | RAB6A-GEF complex partner protein 1 from Mus with 29.43% of identity |
|---|---|
| Blastx | RAB6A-GEF complex partner protein 1 from Mus with 28.61% of identity |
| Eggnog | protein RIC1 homolog(ENOG410XT5J) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020996625.1) |
| Pfam | RIC1 (PF07064.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |