Ll_transcript_104704

• Id Trinity: FTRINITY_DN52906_c4_g2_i6
• Name Transcript: Ll_transcript_104704
• Sequence: TTTTAATTCTGAGTGTGTGTCGGGGTGTTGTAGAAGTTGAGCTCGGTTCTGTTCCCATTTCCCAATCGCAACAAATCCAAATCATGGATCAAAGCTAAAT CACACAAATGCTCTTCATCTTCGATTCCTTACACTATTCTCTGCAATTCTAGATCTATAAAACTTTGATTACAACAAATCTCAACAATAATTACAAGATG TATATGGCTTATGGTTGGCCTCAGGTTATTCCTCTTCAACAAGGACTTTGTCCTTCTCAACAACGGGTTGTGTTCCTCAAAAACGTTAATCGATTGTTAC TTATTGTTTCTCCTACTCATTTTGAACTATGGAGCACTTCTCAGCATAGAGTGAGATTGGGGAAGTACATGAGAGATTCAGATTCAGTGGAGAGGGAAGG AGAAAACTTGCAAGCTGTGTGGAGCCCCGATACCAAATTAATTGCCATTCTTACTTCTTCTTTCTTTCTTCACATTTTCAAAATCCAGTTTTCGGATAAA AGAATACACATTGGAGGAAAGCAACCCTCTGCTTTGTGCCTGGCTACTATTTCTCTTTTGCTTAGTGAGCAAGTTCCTTTCGCAGGAAAGGATTTGTCTG TGAGCAATATTGTTAGTGATAACAAACATATGTTGCTTGGACTTTCTGATGGAACTTTATACAGCATGTCTTGGAAGGGGGAGTTCTATGGGGCTTTTCA ATTTGATCCATATCCTCTTGCTAGTGTTGAAGATTCTCTATTACCACGTACTCTAGACAACGGTCTTTCTCCTAATAGTCAGCCAAAGATTCTTATGCCC AACCACATTATTCCTAATAAGTTTGAAATTAACCAACTGGAACTTTGCCTTCCATTGAGGTTGCTATTCGTCTTGTATTCCAACGGGCAACTTGTCTCAT GTTCCATTAGTAAGAAAGGTTTAAAGCAAGTTGACTATATTAAAGCAGAACAGAGGTTGGCTTGTGTTGATGCTGTATGTGCTTCAGTAGCTGTTGAACA GCAAATTCTTGCTGTTGGTAGCAGAAGAGGAACAGTTGACTTATTTGATTTGGCTGAATCAGTAACACTTATACGAACAGTCTCTTTGTATGATTGGGGG TACTCAGTGGATGACACTGGCCCTGTTAGTTGCATTGCTTGGACACCTGATAACTCTTCTTTTGCGGTTGGGTGGAAGTTAAGGGGGCTTACCGTTTGGT CTGTTTCTGGGTGTCGCCTGATGTCAACAATCCGACAAATAGGTTTAAGTTCTGCATCTTCTCCAATTGTTAAGCCAAACCATGATTGTAAGTATGAACC ATTGATGGGTGGTACCTCACTGATGCAGTGGGATGAATATGGATATAGACTTTATGCTATTGAGGAGGGATCTTCAGAGAGAATTCTTTCCTTCTCTTTT GGAAAATGCTGTCTTAGCAGAGGAGTTTCAGGAACTACGTACATCCGGCAAGTAATTTATGGGGAAGACCGATTACTCATCGTGCACTCAGAAGAGAGTG ATGAACTTAAAATGCTACATCTTAATCTTCCAGTTTCTTATATTTCTCATAACTGGCCTGTTCAGCATGTAGCGGCTAGCAAAGATGGGATGTACTTAGC TGTTGCTGGTCTCCATGGTTTGATATTGTATGATATTCGATTGAAAAAATGGAGAGTATTCGGAGATGTTACTCAGGAACAAAAGATTCAGTGTAAAGGG TTGTTATGGCTGGGGAAGATTGTCATCGTCTGCAACTATGTTGATTCTTCTGACACGTGAGATGCTATTATTTATGTACATGTTTCATGTGGTTGTTTCT TTCAAGTTTTAGTGTTTGTGAAATGTCTCAGCCAATTGGTGCATATAGAAGGGCGCTTGCCTGGAAAAGTCTGACTCTAAAGGCTGCTAAGGCCTTTACA CTTAATATGCTATTACATCTCTAGATCTCATCAAAACTATGGTTTCGGTAACATTTTAATGCAGCTTGCATGATAAGTAACCATTTTGTTCTACATCCAA TTATCTCTTACGCCACCTTATTTTTCTCAGGTATGAGTTGCTCTTTTACCCAAGGTATCACCTTGATCAAAGCTCATTGCTCTGTCGTAAACCATTGCTC GCTAAACCAATGGTGATGGATGTATACCAAGATTATATACTGGTTACATATATGCCATTTGATATTCACATATTCCATCTGAAATTATTCGGTGAATTAA CACCTTCAGGAAATCCAGATTTGCAGCTTTCTGCAGTCCGAGAACTTTCAATTATGACTGCAAAGAGCCATCCTGCAGCAATGCGGTTCATTCCTGACCA ATTTCCAAGAAAATCTATTTCAAACAATTACATTTCACCCTCATCAGATTCATTTTCAAGGGAGCCAGCAAGATGTTTGATATTGAGGGCAAATGGAGAG CTTTCACTTCTTGATTTGGATGATGGACGGGAGAGAACTCTTACAGATTCAGTTGAACTATTTTGGGTCACCTGTGGCCAGTGTGAGGATAAAACTAATT TGACCGAAGAAGTTTCATGGTTAGATTATGGTCACCGAGGCATGCAGGTTTGGTATCCATCTCCTGGTGCTAATTCTTTTAAGCAGGAAGATTTCTTGCA GTTGGATCCAGAGCTGGAGTTTGATCGTGAAGTATACCCTTTGGGACTTCTTCCAAATGCTGGTGTAGTTGTTGGTGTTTCTCAAAGAATGTCATTTTCA GCAAGTGCAGAATTTCCATGCTTTGAGCCATCTCCTCAAGCACAAACAATATTGCACTGCCTACTACGGCATCTTCTTCAGAGGGACAAAATTGAGGAAG CTTTGAGGCTGGCAGAGCTATCAGCTGAGAAGCCTCATTTTTCACATTGTCTAGAGTGGCTTCTTTTTACAGTATTTGAAGCAGATATATCCAGGCCAAA TATGAATAAGAACCAGATCTCAATTCCTAATCATGCTAAAAGCACTCTTTTGGAGAAGACATGTGACCTGATCAGAAATTTTCCTGAGTACTTTGATGTT GTTGTAAGTGTCGCAAGAAAAACCGATGGTCGTCATTGGGCAGATTTGTTCTCAGCTGCTGGAAGATCGACAGAATTGTTCGAGGAATGCTTTCAACGTA GATGGTATCGCACTGCAGCTTGCTATATACTTGTGATTGCTAAGCTCGAAGGACCTGCTGTCAGTCAGTACTGTGCTTTACGGTTATTACAGGCAACACT AGACGAATCGTTGTATGAGCTTGCTGGGGAGCTGGTGAGGTTCTTGCTAAGATCTGGTAGGGAATATGACCAATCATTAACTGATTCAGATAAACTCTCT CCCAGATTTTTAGGCTATTTTCTTTTTCGTTCTAGTGATCGGAAGCAGCCATTGGATAGAAGCACCTCATTGAAGGAGCAAAGTGCTCATATTACATCGG TTAAGAATATTCTAGAAAACCATGCTAGTTTCCTGATGGCTGGGAAAGAGCTCTCCAAGCTTGTTGCATTTGTAAAAGGCACTCAGTTTGATTTAGTGGA GTATCTACAGCGTGAAAGATATGGGAGTGCTCGCCTGGAGAATTTTTCTTCAGGGCTTGAACTGATAAGCCAAAAGCTTCACATGGGAACTTTACAGAGC CGGTTGGATGCTGACTTTCTTCTGGCTCATATGTGCTCTGTCAAGTTTAAAGAATGGATTGTTGTCCTTGCTACTCTATTGAGACGTTCTGAGGTTCTTT TTGACTTATTCCGCCACGATTTCCGGTTATGGAAAGCATATGGTACCACACTGCAGTCACACCCAGCATTTGCTGAATATCAAGATTTGCTAGAAGAACT GGAAGAGAAACTTTTGTCAGTTGCAAACATGGAACAAAAGTGAAAGTACATAATTCATTTGTGGACTGTTTGCACACATTGGTTTGATGATATGCTTGAG TAAGTTTCACCTTGGCCCATACGAAGTTCCGGTAGCTCATGTCACACCTGAAGACCATGGTTCCTTTCCCTTTAATTTGCATAATGGGACAAGAAACTAC ATTTATGTGATGCCTTACCATTATCTTCATGACTAATCATTTTATTGGTGCCAATCCAATCAAATGGGAATGGTACATATAGATAGAGGTTAGTAAGTAT GTGTAGACAAGCATATGCATCTGTGAGGGTTTCGTTATTCTTTTCTCGCTTTAGCCCTCATTTTGTAATGTGTTATGTAAAAGCATCAACAAATCCATTT GTATATATCAATTATGCTCCTGGTCAGTTCAACATTCATAGTAGAATTTATGCAACTTGCTTTTCTCTACTGAGCAAGTTCAAGATTTATTGCTGTTTAC TATTTTTGTCTTTGTAACCACTATTTTCATTGACAGTACTCTAACTAAAATGTTTACTTAATCCATTTTTCAGTTTAGGATCAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_29039;
• Additional information: details;

Expression of Ll_transcript_104704

FPKM

• FPAB: 0.4
• FPNAB: 0.2
• LF1: 0.4
• LF2: 0.4
• LF3: 0.5
• LF4: 0.3
• UF1: 0.4
• UF2: 0.3
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_104704

• Blastp: RAB6A-GEF complex partner protein 1 from Mus with 26.15% of identity
• Blastx: RAB6A-GEF complex partner protein 1 from Homo with 26.25% of identity
• Eggnog: protein RIC1 homolog(ENOG410XT5J)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020218579.1)
• Pfam: RIC1 (PF07064.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;