| Id Trinity | FTRINITY_DN52906_c4_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_104705 |
| Sequence | TTTTAATTCTGAGTGTGTGTCGGGGTGTTGTAGAAGTTGAGCTCGGTTCTGTTCCCATTTCCCAATCGCAACAAATCCAAATCATGGATCAAAGCTAAAT CACACAAATGCTCTTCATCTTCGATTCCTTACACTATTCTCTGCAATTCTAGATCTATAAAACTTTGATTACAACAAATCTCAACAATAATTACAAGATG TATATGGCTTATGGTTGGCCTCAGGTTATTCCTCTTCAACAAGGACTTTGTCCTTCTCAACAACGGGTTGTGTTCCTCAAAAACGTTAATCGATTGTTAC TTATTGTTTCTCCTACTCATTTTGAACTATGGAGCACTTCTCAGCATAGAGTGAGATTGGGGAAGTACATGAGAGATTCAGATTCAGTGGAGAGGGAAGG AGAAAACTTGCAAGCTGTGTGGAGCCCCGATACCAAATTAATTGCCATTCTTACTTCTTCTTTCTTTCTTCACATTTTCAAAATCCAGTTTTCGGATAAA AGAATACACATTGGAGGAAAGCAACCCTCTGCTTTGTGCCTGGCTACTATTTCTCTTTTGCTTAGTGAGCAAGTTCCTTTCGCAGGAAAGGATTTGTCTG TGAGCAATATTGTTAGTGATAACAAACATATGTTGCTTGGACTTTCTGATGGAACTTTATACAGCATGTCTTGGAAGGGGGAGTTCTATGGGGCTTTTCA ATTTGATCCATATCCTCTTGCTAGTGTTGAAGATTCTCTATTACCACGTACTCTAGACAACGGTCTTTCTCCTAATAGTCAGCCAAAGATTCTTATGCCC AACCACATTATTCCTAATAAGTTTGAAATTAACCAACTGGAACTTTGCCTTCCATTGAGGTTGCTATTCGTCTTGTATTCCAACGGGCAACTTGTCTCAT GTTCCATTAGTAAGAAAGGTTTAAAGCAAGTTGACTATATTAAAGCAGAACAGAGGTTGGCTTGTGTTGATGCTGTATGTGCTTCAGTAGCTGTTGAACA GCAAATTCTTGCTGTTGGTAGCAGAAGAGGAACAGTTGACTTATTTGATTTGGCTGAATCAGTAACACTTATACGAACAGTCTCTTTGTATGATTGGGGG TACTCAGTGGATGACACTGGCCCTGTTAGTTGCATTGCTTGGACACCTGATAACTCTTCTTTTGCGGTTGGGTGGAAGTTAAGGGGGCTTACCGTTTGGT CTGTTTCTGGGTGTCGCCTGATGTCAACAATCCGACAAATAGGTTTAAGTTCTGCATCTTCTCCAATTGTTAAGCCAAACCATGATTGTAAGTATGAACC ATTGATGGGTGGTACCTCACTGATGCAGTGGGATGAATATGGATATAGACTTTATGCTATTGAGGAGGGATCTTCAGAGAGAATTCTTTCCTTCTCTTTT GGAAAATGCTGTCTTAGCAGAGGAGTTTCAGGAACTACGTACATCCGGCAAGTAATTTATGGGGAAGACCGATTACTCATCGTGCACTCAGAAGAGAGTG ATGAACTTAAAATGCTACATCTTAATCTTCCAGTTTCTTATATTTCTCATAACTGGCCTGTTCAGCATGTAGCGGCTAGCAAAGATGGGATGTACTTAGC TGTTGCTGGTCTCCATGGTTTGATATTGTATGATATTCGATTGAAAAAATGGAGAGTATTCGGAGATGTTACTCAGGAACAAAAGATTCAGTGTAAAGGG TTGTTATGGCTGGGGAAGATTGTCATCGTCTGCAACTATGTTGATTCTTCTGACACGTATGAGTTGCTCTTTTACCCAAGGTATCACCTTGATCAAAGCT CATTGCTCTGTCGTAAACCATTGCTCGCTAAACCAATGGTGATGGATGTATACCAAGATTATATACTGGTTACATATATGCCATTTGATATTCACATATT CCATCTGAAATTATTCGGTGAATTAACACCTTCAGGAAATCCAGATTTGCAGCTTTCTGCAGTCCGAGAACTTTCAATTATGACTGCAAAGAGCCATCCT GCAGCAATGCGGTTCATTCCTGACCAATTTCCAAGAAAATCTATTTCAAACAATTACATTTCACCCTCATCAGATTCATTTTCAAGGGAGCCAGCAAGAT GTTTGATATTGAGGGCAAATGGAGAGCTTTCACTTCTTGATTTGGATGATGGACGGGAGAGAACTCTTACAGATTCAGTTGAACTATTTTGGGTCACCTG TGGCCAGTGTGAGGATAAAACTAATTTGACCGAAGAAGTTTCATGGTTAGATTATGGTCACCGAGGCATGCAGGTTTGGTATCCATCTCCTGGTGCTAAT TCTTTTAAGCAGGAAGATTTCTTGCAGTTGGATCCAGAGCTGGAGTTTGATCGTGAAGTATACCCTTTGGGACTTCTTCCAAATGCTGGTGTAGTTGTTG GTGTTTCTCAAAGAATGTCATTTTCAGCAAGTGCAGAATTTCCATGCTTTGAGCCATCTCCTCAAGCACAAACAATATTGCACTGCCTACTACGGCATCT TCTTCAGAGGGACAAAATTGAGGAAGCTTTGAGGCTGGCAGAGCTATCAGCTGAGAAGCCTCATTTTTCACATTGTCTAGAGTGGCTTCTTTTTACAGTA TTTGAAGCAGATATATCCAGGCCAAATATGAATAAGAACCAGATCTCAATTCCTAATCATGCTAAAAGCACTCTTTTGGAGAAGACATGTGACCTGATCA GAAATTTTCCTGAGTACTTTGATGTTGTTGTAAGTGTCGCAAGAAAAACCGATGGTCGTCATTGGGCAGATTTGTTCTCAGCTGCTGGAAGATCGACAGA GTATGTTTTCGATCATCCATACATTTTTATTTCCCCTACAGTGTTGACTGTTACATGACCTGACATACAATTGGAAAATATTTAAATGGCATGAAAGTAT ATTTTAATTTGTGCTGGATACGATTTTTTAAGGTTTATCAAGAGTATGATTATAATTTTCTTGCACTTAAGGTGTTGAATTTCTACCTTTCTTCAATTCA GTGCTTCATTTTTTCATGCACCTGCTTGTTCATATAATCAGGAAGCCTGTTTGATGGTATGAACAGACAGGGGTTTAGAAATGCGAGGTTTATTCAAGTG TGAATCCTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29039; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104705
| Blastp | RAB6A-GEF complex partner protein 1 from Mus with 24.54% of identity |
|---|---|
| Blastx | RAB6A-GEF complex partner protein 1 from Mus with 24.59% of identity |
| Eggnog | protein RIC1 homolog(ENOG410XT5J) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449839.1) |
| Pfam | RIC1 (PF07064.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |