| Id Trinity | FTRINITY_DN52917_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_104950 |
| Sequence | CTTTTCCTGAACCAAACCGCTATTTATTGCAAAGAATACTCTTGATGATGCAAGCTATAGCTTCCCACAAAGCTGAGAATAAAATGAGCTCATCAGCAGT GGCAGCTTGCATGGCACCATTACTTCTTCGTCCTCTTCTAGCTGGAGATTGTGAGATTGAAAATGATTTTGATGTAGGTGGTGGTGATGATTCTATTCAA CTTTTACAAGCAGCTGCTGCAGCTAACCATGCTCAAGCGATTGTTATTACGTTATTAGAAGAATATAGCAGCATATTCGGGGAAGGTTCTGAATATCCTG GCCCTGAAATGTTCACTGACTCAGAAGAGAGTGGTTCTGAGAGTGAGGAGGCTACTGATGATGATGATTATTATGACGATGATGAAGAGGAATCAATACA GGAGTCTGACGATGAAGAAGATATTGTTAGTCACACAGACAGTGATACTGGAGACTCTATGGCTAATGATGAGTATGATGATAAGGACCATGGTCTTGCT AGATCCAGTTCAGCATCCTCAAAGGTGAGTGAAGATCTTGAAGTTGATCAGATATTGTCATCAACTCTACTTGATGTCTCACTGCCTCAGTGTGAAGATA TCAAAAGCTATGAAAATGTTCCGAGCCCAATTAAGACCGCTTATGCAAATGAGTTCAATAAGCACATTGATATCGTTGGAGATTTATCCATTGACCAAAC TACAATGCATAATTCAAATTGTTCTAGTCCTTCACCATGCATGGAAAAATCTATAGCCGTGCCCAATGGACTAGCACCTCGGCGCTGCAATATATTCGGG CGAACCGCTGCAAGGAAGAACCTTTCCATGGAATGCGTTAATTATCCTGATGAAGATGAAGCTGAAATTGAGAGACTTGTAGCTGTGAAGACAGAACTGC AAAATCAAATTACAGAGGAGGTTGATATTTGATTTTCTCATGTTAACCTTGTTTATGAGTGTCATAAAACTCTGAAGCCAATCATCCATCTTTACTTCTG CTTCTAGGTGAAGGAAAATACAAAGCTTCAATCTGATGTAGAAAAACGAAAGAAAGCTTTGCAAGAGCGTCGTCTTGCACTTGAGAGAGATGTGGCTAGA CTACAAGAACAGTTGCAAAAGGAGAAGAGTTCTCGGGCAACTCTTGAAGCAGGACCCAAATTTCCTCAAAAACCCTTGTCTGATGTATCCAGTATTGACG AAAAGACCAAGGCAGATCTTGAGGAATTAGTGTTGATAGAAGTAGATCTTGCCAACTTAGAGCAGAAAATTAATGACCTTGGGGTGCGGCTTAATTTACA ACTCGAGCGGAATTATGGATCTATATTGGATTGCTTCAATCAACCCCAACAGATATCAAGCCATGAAAGAAACCTGAAGAATAAGCCAGATACTGAAGTC ACATCCACTTTGCAATCTGAGAGGTCAATAAGTAAGCAGGACACTTATTTTGCTGGAGCTGGAAGTTTGAGTGAGAGAAGGCCAGAGTCAAAGCCAAGAC CTTCAACAAACAAACATCTACCTACATTCAAGAAATCCAGTACTAGGGGTGAGGGAGCAAATTCCAGTACTTCTACACTGACAAAACTGTCATCCAAACT AAACTTTTTGAAGGAGCGCCGTAATCTGGCTTCAAATGAAGGCAATGAGTCCCCGAAGCTGGAAAAAGTATCTGAACTTCTGCTACCACTTCCATCCCCC AAGAAGTCTAAAGGATATGAGTTTCACCTACCACCTCCATCCCCGAGTAAGTCTCGAGGATATGAATTTTACCTACCACTTCTATCCCCGAAATCCAGTA AGTCTAGAGGATATGAAACTCATTCTCCAAGAGCTCCAGGCAAAGAAGGTGAATCACTCCAACATCCGGAGAAATTGAGAAAATCGGATAGTCAACCAGG CCATCACCCAGATAGACAGAATCAACATCCACCGTTATACTTGAAAAGAGGAAAGTCAGAAGGCCACCATCACTCATGAGTCTTATAATGTGATGATTAG AAGGTTACACAACAAAATCCACATGATAGGAAGCCATTGCAATCATTCAGCAGTGTCCATGTCCAAGTGTGGCATTGCTATGTCTTAGACAAGTGGTTTA TGAAATGACAGTAAGAGAAGAATCCTTCCCTGATATGGTTAGCACAAAGGGCTATTTGTAAAAGAAGCATCACACCATTTACCCCAAAATGCAACATAAA CCATCCCCATGACATAAACCAAGCTATATGTAACATAAAACATGCTGGTTTTTGCTGACTCCAAGCATGTTGGTCTTGTTGTTATTACATTATTACCCTA TTGGTTAACTGCAACAATGTTGAGTTGCTTGGCCTAAGCTGGCAAAACATTTTGCAGATAAACCTTGCCCAAGTTTCTTTAGTAATAAATTAGACGACCT CATGTACCCAAAAAAACTGGATATAATTCAGAGCCCCATTAAACTTATCAGCATTTCTAACTGGCAATATATATCAATATCCGGATATAAAAAGAAGTGA AAATTAATGTCCACTATAGTTAAGGAGTAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29129; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104950
| Blastp | Rho GTPase-activating protein REN1 from Arabidopsis with 48.9% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein REN1 from Arabidopsis with 38.91% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XR4E) |
| Kegg | Link to kegg annotations (AT4G24580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462320.1) |
| Pfam | RhoGAP domain (PF00620.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |