| Id Trinity | FTRINITY_DN52940_c3_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_104660 |
| Sequence | GTGGATTCTGAGATGTTATCGCGTGTTGTTCTTTTATTCTGATTTTGCGACGCTCTCTTCTCTTCTCTTCTTTCTGGAGACTAACTCTTCGGTGAGAAAG TGCAAGCAATGGATGAGGTCAAGAAGCATAAATCTAGGAAAGACGGGGATTCTAAGCGGAGTCACCGTGATCCAGATCGTAATGCCGATAAGAGAGATTC CGAGACGCGGCGTCATGATAAAGACAAGAATAGTGATTCTGAAGATAGGCATGATAGAGATAGGGAGAAACGTAAGGATAAGGAAAGGACCCGAGTCAAG GATGTAGATAAAGAGCGAACTCGAGACAAGAAAGTCGAAAGAGATAGGGATGACAAGGAAAGGGAGAGGAGCGATAGGGTGAGAGAAAAAGATCGAGACA AGGTTAAGGAGAAGCGACGAGAGAAAGATAGGGAAAGGGAAAAGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGAGGGAGCG TGCGAGGGAGAAGGAAATAGAAAGAGAAAAGGGGAGGAGAGGACACGAGAGGGAGAAGCGTAGGAACGTTGATAGCAAAAACAGTGATGATGAATCGAGG GAGAGAGATAGGAAGCGGCATAGGAAAGATGATGATGATTACAAGGGGCGAGAGAGGGAAAGGATTGTCAGCAAGTCGAACAGGCAAACTGAGAATAGTG AAGCTAGCCCAAGGAAGAAGAGTAGTGAAGATGAGGACGGTACTAAAGATGATGAGAGTAAACCTACACGCGAAGAGGAGATGGAGATTGAACAAAGGAG ACTGGATGATGAAATGGAAAAGAGGCGGAGGAGAGTTCAAGAGTGGCAAGAGCTTAAGAGGAAGAGAGAAGAAACAGAAAGAGAAAAGCAAGGTGAAGCC AGTGCTGATGAACCTGAGTCCAGGAAGACTTGGACCCTTGAAGGGGAATCTGATGATGAAGAAGGACCGGCTGCTGGGAAACAGGACACAGCTATGGATG TAGATGAAGATGAAGATGAAAAACCTGCTGACAAGGAACCTATGGATTTGGTGGTAAGTCATGATAATGGAACAGTTGCGTCCGACTTACAGGATGGAAA TACTGGTGCTCCTGAAGATGAAGAGATCGATCCATTGGATGCTTTCATGAATTCTATGGTTCTTCCTGAAGTTGAAAAGCTGAACAATGCTGCAGCCTTG TCACTTACTGATAAAGCTGCTGACTTGAAGCCCAAGGATAAGGAGGATGAGCAAAGTCGTGGTGGACAGGCAAGGAAAGGTTCAAATAAATCTATCGGGA GAATAATTCCCGGTGAAGAGTTTGACTCAGATACTGCAGATCTTGAATTTGAGGGGGATCCATCCGATGAAGATGATGATGAGTTCATGAAAAGAGTGAA GAAAACAAAAGCTGAGAAGCTTTCTATAGTTGACCACTCGAAAATTGATTATATGCCATTCAAGAAAAACTTTTTTATTGAAGTGAAAGAGATATCGAAG ATGACTCTTGAAGAAGTTGCATTATATAGGAAGCAGTTGGAGTTGAAGATACATGGAAAGGATGTGCCGAAGCCTGTAAAATCATGGCACCAGACTGGAC TTACCAGCAAAATTTTGGACACAATAAAGAAGATGAACTACGAAAAGCCGATGTCTATTCAAGCTCAGGCGCTGCCAATAATCATGAGTGGTCGAGACTG CATAGGCATTGCTAAAACTGGTTCTGGCAAAACACTTGCTTTTGTTCTGCCAATGTTGAGGCATATCAAGGATCAGCCACCAGTTGTTGCAGGAGATGGA CCTATTGGGCTTATTATGGCCCCCACAAGAGAGCTTGTTCAACAGATTCACAGTGACATAAAGAAGTTTTCAAAGGTAATGGGTATCAGGTGTGTGCCTG TCTATGGAGGTTCTGGTGTTGCTCAACAAATTAGTGAGTTGAAACGTGGTGCTGAGATAGTGGTTTGCACTCCAGGTAGGATGATCGACATACTATGCAC CAGTAGTGGAAAAATAACCAACCTGCGTCGAGTCACTTATCTGGTTATGGACGAGGCTGATCGAATGTTTGACATGGGATTTGAACCTCAAATCACACGT ATTGTTCAGAATATCCGGCCTGATCGTCAAACGGTTCTCTTCTCTGCTACTTTCCCCCGTCAGGTCGAAATTCTGGCTCGTAAAGTTTTGAATAAACCTG TTGAAATACAAGTTGGTGGGAGGAGTGTTGTGAACAAAGACATAACACAGACTGTTGAGGTGAGGCCAGAAAATGAGAGGTTCTTTAGACTCTTAGAAAT ATTGGGGGAATGGTGTGAGAAAGGAAAGATTTTGATATTTGTTCACTCACAAGAGAAATGTGATGTTTTGTTCAAGGATTTGCTCAGGCATGGTTATCCA TGCCTTTCTCTTCATGGGGCCAAGGATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTTTGCAATTTGTTGGTTGCAACAAGTATTG CTGCCAGGGGATTAGACGTCAAGGAGCTTGATTTGGTCATTAATTTTGATGTTCCAAACCACTATGAAGATTATGTACATCGTGTTGGGCGCACTGGCCG TGCTGGCCGAAAGGGTTGTGCCATTACATTTATTTCCGAGGAAGATGCAAGATATGCACCAGATCTGGCAAAAGCCTTGGAGCTATCTGAGCAGGTTGTT CCCAATGACCTGAAAGCTCTTGCTGATAGCTTTATGGCGAAAGTGAATCAAGGACTTGAGCAAGCCCATGGAACTGGTTATGGAGGCAGTGGATTTAAAT TTAATGAAGAGGAAGATGAGGTGAGGAAGGCAGCAAAGAAAGCACAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAGATTCTGAAGATGAAGATGA CGGTATCAGGAAGGCAGGTGGTGACATCTCACAACATCCGGCTCTTGCTCAGATTCTTGCTGCCCAGAAAGTGAATTCTCCAGCAATGCCGAATCCCATC TCCGTTGGCCAGCCGATTTCAAATGGCGGGATACCTTCTTTGTCAGCTGTTCTTGGTCTCCAGACCGCAACAGTCTTGCCTGGGAATGATGTGGCAGCTC GAGCAGCATTAGCTGCTATAAACCTGCAGCACCACTTAGCAAAGATACAATCTGAAGCATTGCCAGAGCATTATGTGGCCGAGTTGGAGATAAATGATTT CCCCCAGAATGCTCGCTGGAAAGTGACGCACAAGGATACTTTAGGCCCAATTTCTGACTGGACTGGAGCTGCAATTACCACTAGGGGGCAGCATTTTCAA CCTGGCAAGATCCCGGGACCTGGAGAACGCAAACTCTACTTGTTCATTGAGGGTTCCAGTGAGCAGTCTGTTAAGAGAGCTAAAGCAGAGTTGAAGCATG TTTTGGAAGACTTCACAAATTTGCAACTTCCTGGTGGAACTCAACCAGGGAAATACTCCGTCGTATGAAGGGCAAAATGGGACTCTGTATAACACACTTG TTTCGCGCCTCAGTCTGGGAAAGGCTGCACTTATTGTCTGCCTTTATTACCCATTCATTGTAATACAGCATTCATTATGGTGCAGGTGGGCCTTTTGAGC CTATGCTTGCCTGTTCAATATACAATTGGTAAGAGCGGACCACCTTTATTATGTCGGCAGGGGTTCAAATCCTGTCAGGGTCAGTTGTTGGATGGTTATC TGTAAGTACATCAATAAGTGCTCGTTGAACCTCGAGACTTGCTGATCTTGAGCTGAGGCAGCTATCCCATGACCCGAAATTTTTTTGTTACTAAGAAAAA TTGTTCTGTCCATTTTACTTGTTTTGTGGCTGTGAAAGGTGCTAATAATATTGCGGCTTTGTTTCATCTAGGTCCTGTTTGATTTTGCAGCAAAAATCTC AAAATCTTGATTGTGCCCTGTAATATCCCATGTGCATGAGTTGAGTCTTGGCCTCCTAGAACCTATGAAACTATCATGTGTTTGTTCTTCTGATTGTTAT ACGTGTCACTTTCAGATTTTGGCTTGGAGTTCTTTCATGATCATATCACGAGGGGAAACAAGGCGTAATGGGATATCGCATTATTGCCATAGTATGGATT TCAGAACGTGTACCAAAAACAATGCCCATGGCTCTTATACTTATCCTATCTAGAAAGAACTCTCAAATTCTGCATTTGTATTGCAATTCATAGGAATGTT ATAAAATATTATATGGTTTGCTTAAAGCATTTCTTGGAATTGTGGATGGAAAATTTTTGGCGACATTTTTCAAACAACTCTTATATTACATTATCTTTTT ATTTATCTCTCTTTAATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_29321; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104660
| Blastp | DEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 69.87% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 70.41% of identity |
| Eggnog | ATP-dependent RNA helicase(ENOG410XSQV) |
| Kegg | Link to kegg annotations (AT1G20920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444598.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |