| Id Trinity | FTRINITY_DN52946_c0_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_106771 |
| Sequence | CTTTTTTTACTAATAGAGTAGTTAGTTTTCCATTTTGATTCATGCTGTGGCCTTCAATTGACTGTTTTTGTCGTTGGGAATTTTACTTGTTTCGTGAATT GACGTTTTTCTAACTAGATGTGTGGCAATGGAGTCAGATGTTTTGCCAAATTTGTTTCTCAGCTTGAGAATTTACATGGGAGGCATAGGTATGGTCATCA TCTAGTGCCTAGCACTTCCTCAATAAAATTTGTTATGTTTTCCCCTTTCAAGAGTTTGGTTTTTTGAAGCACAAACACTCTCGTCCTTCATCAGGTGTAG GACTGAGAGCCTTGGGCTTTTGACACTGGCACTTCTTTGAGTAGTAGGACACATAATTAAAAAATGTCCGGCTTAAACATGTGCCAAACATGGTTTGCAC ATGATTGAGGGTCGACCGATACCCCCATAATGATTTGATGATTGAATGACACAACTACTTTAAACAATTTCATAAAATTTGTCAAAGCCACCTCAACTAC TTCCATTTGATAATGAATGACTTGTTTAAATTTAATCTAATGTTGTGTTTTTATACTTTGCAGTTTTACCGTACATACTGGTGCTGGACTAATTGTTCCT GAAGTTCTTGAGGATGGAAATGTCAGAGTGGATATGGGGGAACCAATTCTTAAAGCATCAGATGTGCCTACTAAGTTACCTCCAAATAAGGATCATGCTG TTGTTAAATCGGAGCTAGATGTAGACGGAACTATCTGGAACGTGACTTGTGTTAGCATGGGAAATCCACACTGTATAACTTTCAGTGGAAAAGGATTCGA GAATTTGTTTGTTGATGAGTTGAAGCTAGCAGAAATTGGCCCAAAATTTGAACATCATGAGGTGTTCCCAGCACGAACAAACACAGAGTTTGTGCAAGTT CTGTCTGAATCTCACCTAAAGATGCGTGTTTGGGAGCGTGGAGCAGGAGCAACTCTAGCCTGCGGAACTGGTGCTTGTGCTACTGTTGTTGCAGCCGTTC TTGAAGGTCGTGCTGGGAGGAACTGCACGGTTGATCTACCTGGAGGGCCTCTGCAGATTGAATGGAGGGAGGAAGATAATCATATCTATATGACAGGCTC AGCAGAGCTAGTTTATTACGGTTCTTTGCCTCTTTAATATGTTACCTTGAATTTATTGTTAAAACTACTACTTCCTTTTTTGTCATTAAAAGCTAGAACT TCCATAAATTATGATTGTTGAATAATAACTATATATGAAGTAATGGAGTTGGAAGATAGAGATGAGTACGAGTGAATGTTGTTCTTATAATATGTCATAG TTTACCTTTATCTAATCACTTCACCAAGTCTTTATGGAAGCTGAAAATAAGATAAATCTTCCTACTTTTAAAATGAAAAAACATTATTATTTTTCACTAC ACATCTTACTAATGATTAATATTCTTCTCTCCTATCAAATAATAAAATAAAAATGTTTTTCTTAGCCACTCTTTTCTCTTCCGACTTTCTTCATAACTAG AGGTGAGCATGAGATGAGTTAAGCATAGCTCTCACTCGTCCATAAATATTGACCTAATTAGGATAAGACTCGTGAGAGACAGATCCAAAATAAGACGAGT CAAGATAGGGGTGAGTCAGAGTTGGAAAATGACAAAACGACAAATGTATATTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29395; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106771
| Blastp | Diaminopimelate epimerase, chloroplastic from Arabidopsis with 80.24% of identity |
|---|---|
| Blastx | Diaminopimelate epimerase, chloroplastic from Arabidopsis with 80.32% of identity |
| Eggnog | Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (By similarity)(COG0253) |
| Kegg | Link to kegg annotations (AT3G53580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444390.1) |
| Pfam | Diaminopimelate epimerase (PF01678.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |