| Id Trinity | FTRINITY_DN52955_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_105788 |
| Sequence | CAGAAACATCTTAACCCACCATGGTTTTGTCCGGAATGTTCCACACCCTTCTGATCTTTTTTGGTGCATTGCCACCTTCTACACAATTCCACCTCTTTCA AATATCAACTCTTTCTAACCATTCATCAACCATTCACCAAAAATATATCACAAGCTTCAACAAAAGCGTTACATACACAAAATCTATTATCTCTTGCAGA AAATCTAGTACCACTTACAGAAAGTCCATTCCAAAACCCAAAGTTTGAAACTTTAGAAGAAAAAGAAACATGGGTGTTGACTACTATAAGATTTTACAAG TTGACAAGAATGCAAATGATGAAGACTTGAAGAAATCTTACAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGATGCTGA GACTAAATTCAAACAGATCTCTGAAGCTTATGAGGTTCTAAGTGACCCTCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGATGGACTTAAAGGCCAA GTGCCACCTCCGGATGCAGGTGGAGCTTCATTCTTCCAAAGTGGAGATGGTCCTACCACCTTTAGGTTCAATCCAAGAAATGCAGATGACATTTTTGCTG AGTTTTTCGGATTTTCAAGCCCGTTTGGTGGAATGGGGGGCGGTGGCGGCAGCGGAGGCATGAGGGGTGGGACAAGGACCTTTGGTGGAGTATTTGGTGA TGATATATTTAGTTCATTTGGGGATGGCAGTGGCAGGCCAATGAGTCATGGTCCACGAAAGGCGTCTCCTATTGAAAATGTCATGCCTTGTAGCCTTGAG GATCTCTATAAAGGGACCACCAAAAAGATGAAGATCTCAAGGCAAATTGCAGATGCTAGTGGGTAATACTCTGTGCTTACCCTTTCTATTTAGTATACAT TTTTTGAGTTTGTTGCCATTACAGTTTTCACTACTTTTTTTGTGTTCTTGGTGTCAATCCAAGATTATAGGGATGGCTACTTAAGATAGAAGTTATATGT TTAATTTGTTTGGTTCAAAGGAAGCAAGGGAATTTAACATTGTAGTGCAAAATCAGTGGATGATTTTTTTGGTAGTATGCTCCTTTTTTATCTTCTTTTC ATTGAGTTGGTGAGTTTTCATCATTGGACAAGGGTTGATTTTTTTTTGCAGTTAGAACTCAGTCACATTCAAAATGTGGTAGAACTGTCATCTGGCTCAA TTGAAAGAGGGTGAAAGGGAGTGGCTTGTAGTGGAATGGATTAATAGCACTGACTCTTGACGCTCCCTTACCATTCTCCGTCCTCTAAAATCTTCTTCTA TTAAGTTCTGCCGTTTAACTCGATGCCATAAAACATTAGAGAGGGATGATGATATGTAGGGAAGAAATGGTGGTCAGTTGTGATAAATGCAAAATGTGTT TAGTGTGAGCTGTTTTTTATCTAGCAATGGAGTTACCTAGGTGATATGTATAGGCTGGCTGAACTCCATGGAAGGAAAACTTTGCCGGTGGAAGAAATCT TAACCCTTGAAATCAAACCTGGCTGGAAAAAGGGAACGAAAATCACCTTCCCAGAGAAAGGGAATGAGCAACCAAATATTATTCCTGCAGATCTCGTGTT TATTATCGACGAGAAACCCCACGGTATATTTACAAGGGATGGCAATGATCTTGTTGTCACACAAAAGGTATCACTTGTAGAAGCTCTTACAGGCTACAGT GTCCATCTTACAACTCTTGATGGCAGGAATCTGACTATTCCTATAAACAATGTAATTCATCCAAACTATGAAGAGGTTGTCCCAAGGGAAGGTATGCCAA TTCCAAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAGTTCAACATCAAATTCCCAACTAGGTTAACATCAGAGCAGAAAGCCGGAATTAAGAAGCT TATTGCACCATGATAGATAGATCCTGCGTATAGTGTTTATCATTTTGCTCCCCTTTGTGCCATTTTTCCTCCAAGGATTGACATGTATGTAATCCAGGCA ATGCTGATTGAGGTTTGAGGATTAACAACTATATATGATTAATAAAGAGTACTTCTTTTGTTATGTTGTCATAAGTGCTATTTTTTCAAGATAATTGTTG GTATGTTTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29468; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_105788
| Blastp | DnaJ protein homolog 1 from Sophophora with 44.61% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 13 from Homo with 47.02% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (Dmel_CG10578) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422500.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |