| Id Trinity | FTRINITY_DN52955_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_105796 |
| Sequence | CAGAAACATCTTAACCCACCATGGTTTTGTCCGGAATGTTCCACACCCTTCTGATCTTTTTTGGTGCATTGCCACCTTCTACACAATTCCACCTCTTTCA AATATCAACTCTTTCTAACCATTCATCAACCATTCACCAAAAATATATCACAAGCTTCAACAAAAGCGTTACATACACAAAATCTATTATCTCTTGCAGA AAATCTAGTACCACTTACAGAAAGTCCATTCCAAAACCCAAAGTTTGAAACTTTAGAAGAAAAAGAAACATGGGTGTTGACTACTATAAGATTTTACAAG TTGACAAGAATGCAAATGATGAAGACTTGAAGAAATCTTACAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGATGCTGA GACTAAATTCAAACAGATCTCTGAAGCTTATGAGGTTCTAAGTGACCCTCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGATGGACTTAAAGGCCAA GTGCCACCTCCGGATGCAGGTGGAGCTTCATTCTTCCAAAGTGGAGATGGTCCTACCACCTTTAGGTTCAATCCAAGAAATGCAGATGACATTTTTGCTG AGTTTTTCGGATTTTCAAGCCCGTTTGGTGGAATGGGGGGCGGTGGCGGCAGCGGAGGCATGAGGGGTGGGACAAGGACCTTTGGTGGAGTATTTGGTGA TGATATATTTAGTTCATTTGGGGATGGCAGTGGCAGGCCAATGAGTCATGGTCCACGAAAGGCGTCTCCTATTGAAAATGTCATGCCTTGTAGCCTTGAG GATCTCTATAAAGGGACCACCAAAAAGATGAAGATCTCAAGGCAAATTGCAGATGCTAGTGGGAAAACTTTGCCGGTGGAAGAAATCTTAACCCTTGAAA TCAAACCTGGCTGGAAAAAGGGAACGAAAATCACCTTCCCAGAGAAAGGGAATGAGCAACCAAATATTATTCCTGCAGATCTCGTGTTTATTATCGACGA GAAACCCCACGGTATATTTACAAGGGATGGCAATGATCTTGTTGTCACACAAAAGGTATCACTTGTAGAAGCTCTTACAGGCTACAGTGTCCATCTTACA ACTCTTGATGGCAGGAATCTGACTATTCCTATAAACAATGTAATTCATCCAAACTATGAAGAGGTTGTCCCAAGGGAAGGTATGCCAATTCCAAAAGATC CTTCAAAGAAGGGTAACCTTAGGATCAAGTTCAACATCAAATTCCCAACTAGGTTAACATCAGAGCAGAAAGCCGGAATTAAGAAGCTTATTGCACCATG ATAGATAGATCCTGCGTATAGTGTTTATCATTTTGCTCCCCTTTGTGCCATTTTTCCTCCAAGGATTGACATGTATGTAATCCAGGCAATGCTGATTGAG GTTTGAGGATTAACAACTATATATGATTAATAAAGAGTACTTCTTTTGTTATGTTGTCATAAGTGCTATTTTTTCAAGATAATTGTTGGTATGTTTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29468; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_105796
| Blastp | DnaJ homolog subfamily B member 4 from Pongo with 45.56% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 4 from Pongo with 43.91% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (100174554) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422500.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |