| Id Trinity | FTRINITY_DN52955_c3_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_105802 |
| Sequence | CTCAAACCTCAATCAGCATTGCCTGGATTACATACATGTCAATCCTTGGAGGAAAAATGGCACAAAGGGGAGCAAAATGATAAACACTATACGCAGGATC TATCTATCATGGTGCAATAAGCTTCTTAATTCCGGCTTTCTGCTCTGATGTTAACCTAGTTGGGAATTTGATGTTGAACTTGATCCTAAGGTTACCCTTC TTTGAAGGATCTTTTGGAATTGGCATACCTTCCCTTGGGACAACCTCTTCATAGTTTGGATGAATTACATTGTTTATAGGAATAGTCAGATTCCTGCCAT CAAGAGTTGTAAGATGGACACTGTAGCCTGTAAGAGCTTCTACAAGTGATACCTTTTGTGTGACAACAAGATCATTGCCATCCCTTGTAAATATACCGTG GGGTTTCTCGTCGATAATAAACACGAGATCTGCAGGAATAATATTTGGTTGCTCATTCCCTTTCTCTGGGAAGGTAAAACAACAACCGGAAGAACAAGTT CTTGCTTCTATGATGAAAAACCTTCCATGGAGTTCAGCCAGCCTATACATATCACCTAGGTAACTCCATTGCTAGATAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29471; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_105802
| Blastp | DnaJ homolog subfamily B member 13 from Homo with 47.24% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 13 from Mus with 46.46% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (374407) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422500.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |