| Id Trinity | FTRINITY_DN52956_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_107158 |
| Sequence | AAATAAACCTCTTCCCATGCAATAGTTAGAAATTGTTGACGATATCGAGCTGGAACAATTTATTCCTCCGGAATTCCGCGCTTGAGCGCCAAAGAATTTC CCGTAAAACATTGCGACGTCCCTGGTGCATGAGGCATAAATGTAGTGAGAGTTGTGAAGTAAAAGAGTTAAGAGTTATTGTGTAGTGCAGTTAGCATATT GAGAATTCATTCTCTTCCACCATAGAAATGGATCCATTGGATGCATTGATCACTCAAATCCAAGTTCTATCAACTTCCCCTTCCGATTTCTCGCACCTTC ACGCTCTTCTCAAACATGCCTCCAATCTCATTCTCCGTTTCGATTCTCATCGTTTATCTTCTCTTCTCTCTCATCTCCACCCTTCTCTTCATTCTCTCGG ATTCCTCTATATACTAGAAGCGTCCATGACTGTTCCGGTTTCGAAACAGCAAGCTGAGATATTAGTTCCAATCACTACTAGATTCATCAGTGCATGCAGC ATGGAACAAATTCAGTTGGCACCTGATAAATTTATATCTGTGTGTAAGAAGTTGAAGGACCAAGTAGTTTTGTTGGAGGCTCCCATACGCGGGGTGGCTC CCATGTTAGCCGGTCTTAGGAAGCTTCAAGTCTCAACGGAACGTTTGACTCCACTGCATCCTGAGTTTCTTCTGCTGTGCTTGTTGGCGAAGTGCTACAA AACTGGTCTATCCATATTGGACGATGATACTTTTGAAGTAGACCAACCAAGAGATCTTTACCTCTACTTTTATTACGGAGGCATGATATGCATTGGACAG AAGTGCTTTCAGAAAGCATTGGACCTTCTGCATAATGTTATAACTGCTCCGATGTCTACAATGAATGCTATAGCTGTTGAAGCTTACAAAAAGTACATAT TAGTTTCTCTCATTCGCCATGGACAGTTCTCTACCAATCTTCCAAAGTATTCTTCTTCAGTCGCTCAAAGAAACCTAAAGAACTTTTGTCAGCCTTACAT TGAATTGGCAAATAGTTATGGCACTGGCAAAATTGCAGAATTGGAAGAGTATGTCCAGACGAACACACACAAGTTTGAGTCTGACAACAACCTTGGACTG GTTAAGCAGGTTGTATCATCCATGTATAAGCGGAATATTCAAAGGTTGACCCAGACATACTTGACCCTTTCTCTCCAAGATATAGCCAACACAGTGCAGC TAAATAGCCCCAAGGATGCTGAAATGCATGTGCTACAAATGATTCAAGATGGTGAGATATATGCAATGATCAACCAGAAGGATGGAATGGTGAGCTTCTT AGAGGATCCTGAGCAATATAAAACCTGTGAGATGATTGAACATATTGATTCATCAATCCAGAGAGTAATGGCACTATCTAGGAAACTAGCTACAGTGGAT GAGCAAATTTCTTGTGATCCCATATACTTGTCCAAGGTCGGGAGAGAGAGACAGAGATATGACTTCGACGACTTTGACGTTCCACAGAAGTTCAACATCT AAGGCTAGGCCACCTGCTCCTAAAGGTTTCTATTATCTTGTGAGTGATGTAGCAGATTTGGTTCATTAATCTGCGTGTAGATTAGTTTCTGCTCCCAAAT GGAAGAATTTTTCTGTGATTATAAACTTTTGTTCTATTGGGAAGTAGCTCAGAGGATGCTCAATTATCTTTAGCTATAAACTACCTACACTTTTTTACTG CACTGTGTACATTTATGCCTGCTCTATTGACCTGTCTAAACGTAGTTGCTATATGGGTGAGATCTCAAGTGAAATACTGAATGTATTTTACTAATCCTGT TAGGGTGTCAACTTTCTAGCTCTGGTAATTTATGAGAGTTATATGAGGGAAGAAATTACAATAGTATGATGTGGTGTGCTTGGTAACCATAATTTAAGGG ATATATAGGCTTAATTCACCCAACTGCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29474; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_107158
| Blastp | COP9 signalosome complex subunit 3 from Arabidopsis with 62.68% of identity |
|---|---|
| Blastx | COP9 signalosome complex subunit 3 from Arabidopsis with 62.68% of identity |
| Eggnog | COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis(ENOG410XRKY) |
| Kegg | Link to kegg annotations (AT5G14250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427626.1) |
| Pfam | PCI domain (PF01399.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |