Id Trinity | FTRINITY_DN52961_c6_g1_i1 |
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Name Transcript | Ll_transcript_104872 |
Sequence | GCGGGGAAAGATTTGTTGGAAGGAACAAAAAATCAATCAAATCAACGCAGAGTAAAAGGAGAACGGGTTTCTCTGTTTTCACCATTATTACCTGTTCTCC TTTTTCTTTCCAACAAATTCAAGACCCAAATCATTATTCCTCTAAATTCTCATTCTTTTTTGTTAACTGTTGATGTACCAATCTAACAATTCTACTTTTT GAACCCTAAAATCATACAATTCATAATATTTGATTGGAATTTGGGATGGAATCTTCACAAGGATCTAGGTCTAGTACTACTACGTTGGCTGGTTTGGTTG AAAATGCATCATCTATTCAGAGGGATGAGACTCGTGTTGATGGAATCCCTATTTATGTTAAGGAACTCATTGCCGGTGGTTTCGCCGGTGCTCTTTCTAA AACCACCGTTGCACCCCTTGAACGTGTTAAGATACTTTGGCAGACAAGGATAGCAGGATTTCACACTCTTGGTGTGTATCAATCTTTGAATAAGTTAGTA AAGCATGAAGGCTTTGTAGGATTATATAAAGGAAATGGAGCTAGTGTTATCCGGATTATTCCATATGCAGCCTTGCATTTTATGACATATGAGCGGTATA AAAGTTGGATCTTGAATAATTATCCTATGTTGGGGACGGGGCCTTTTATTGATCTTTTAGCTGGCTCGGCAGCCGGAGGAACTTCAGTTTTATGCACATA CCCCTTAGATCTTGCTCGCACTAAACTTGCTTATCAGTTGACAGACACTAGAAGTATTGAAAATGGTATGAAGGGAGTTCATTCTCGGCCTGCACATAAT GGCATTAAAAGTGTACTTACAAGCGTCTATAAGGAAGGGGGATTTCGTGGACTTTATAGGGGTGCTGGTATGTATGTTGCAATATCTACCAATACAACCT TTATGCTTGGTCATCATAATTGTTTCCTGCTTGTGAGGAGAATGTTTTCTTAGAGCATGTCTCAATTATCATCTCTTGTATTTCACTGCTTTATCCTCTC TTTTTTAGAACATTAATTGAAAACCACACTTTTTTATTTGCCTTAGGTCCAACCCTTACTGGAATTCTTCCTTATGCTGGTTTAAAGTTCTACATGTATG AGAAGTTAAAATTGCATGTTCCTGAAGAACATCAAAAGTCCATTTTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGGTTGTTTGGACAGACTGTAACATA CCCTTTAGATGTTGTTAAGAGACAGATGCAGGTACTTCAACACAACTTTGTGGACTCAGCAGGACAAGTTTGTCAACATGGACTTATATGTAGCACTACC ATCTTTTGTTAGAGCTATTATACTCATGATTTTTGTTTGTGCCAGGTTGGCAGCCTGCGTAATGCATCTCGTGAAAATGTCGTATACAGAAATACACTTG ACGGACTTAGGACGATTGTTCGTAATCAAGGATGGAGACAATTGTTTGCAGGCGTAAGCATTAACTATATAAGGGTAATGCTCATCACTTAATCATAGCC AATTTACTTAACCTGAATTTTAGATTGCTTTTTCACATATTTCAAGTGATGTTATTTGTTTTACATATCACATACAAATCAAATCATGACCAAAATAACT CTTTCCAATTTGTGCTAAAAGTGCTACTTTTACTACGGTCTTTTCTGTTCTCTATATTTGGGTTGTCAAATTTCTATCTTATTCCCTGCTTTATTATGTG GGAGTGTATAAAAGCTTATATCTGTCTTAGATTAAGTTCACATGAAATTGACTTGAATAAATTGGATGTTGATTTTGTCAATGCATCTGTGATATATAAT GGTAGATAAGAGGAGCTGATACTTTTATAAATATGAAAGCCAACTTTAGGATTGTAAACTATTTCATTGGTAGCATCTATAATGTTTCCATTTTAAACCT TGAATGCTATGTCCACAGATTGTTCCTTCAGCTGCAATTAGTTTCACCACATATGACATGATGAAAGCTTGGCTTGGTGTTCCACCTCAACAAAAATCTA GATCAGTTTCTGCAGCATGATTCATCAGTGCTCAACTTACACTGACACGTTCTGATTCATTCCATTTTTACTTCAAATGACTACCACAACTTATTGTTTT AGAGAGGAGCCTCTTTTGATTAAATATTAACTAATGCTCAAGTTTAGTTGTCATATTTAGGAAGTCCTTTACACTGATACACATTATTTCTTTAACCATA ATGTAACTATAGCATGGCCATTATTCCTAAACTATTGATGCATTATTACAAATGCAGTTATTTCTGTATTTCTTTAACCTTAAAAGTAACTTCAATTGAA TGTATGCATCCTGGTTAAGATAACTTGTAAATGCAGTTTGTTTTTTACACTGATTATTATATTCACTGTCG BLAST |
Tissue | flowers |
Gene name | LI_gene_29521; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104872
Blastp | Mitochondrial carrier protein CoAc1 from Zea with 60.29% of identity |
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Blastx | Mitochondrial carrier protein CoAc1 from Zea with 60.29% of identity |
Eggnog | Solute carrier family 25(ENOG410ZRF1) |
Kegg | Link to kegg annotations (100193242) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437844.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |