| Id Trinity | FTRINITY_DN52966_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_106840 |
| Sequence | GAAGTGGATGTTTTGTATATTGAGATAGAGACAAATTGGGATGTGTTTGTGACCGGGATTTGCGTCAAATCCATTCCCAATCACTAACCTTTCTTCACCT TTTTCCCTTTTTCTTTCATTCCTTTTGTTTCTCACCACACGTTTCTCACACCATCACCATCACCATCACCATCACAATCCATTTCACTCTTTATTTTTCA TTTCACTTTTCCTATTTTGGAATCAAATACATTAACATAATCACATGCATACACCATATACATTCATATTCTTCACTTAATAAAATATCATTCCAAACTT GTGTCTTCAAAACTCAAAACCCCACAATTCTCATTTCAACCCTTCATTTGCTTATTGCAAAAATTTCCCACCCCTTTGTTTTCTCTCTCCAAAGTTTGCT TCTTTTGCATCTCTTCTCCTTCAAAGTTTGAATCTTTCCACATTGGTTGCCTTGAATTGAGGTACAAGATCAGATCTGTTTACGTGACTCTGGATTCAGT TGCAGATAACAGAATTGGGCTGATCTGGTTGACCTTTGGAGGTTCAGAGAATTCAAAATTTCATACTTTGAATTGAAAAAATGATTGTGAGGAAAAACAT GGGACGTGCAAAGTCACTACTCATGCTGCTTATAGTGCTCGGTTTTTCGTTTGCAACATATAATCTGGTATCTATGATCATAGACCATAATAAGAATGAA GGTTTGGTGGCAGATGAATCTGTTGGTGGGAGGAAAGTGATAGGATCAGCAAAGTTTGGTTCAAAGTATCATGTTGCCTTGACTGCAACCGATGCTGCTT ATAGCCAATGGCAATGCAGGATTATGTACTATTGGTATAAGAAGGTGAGGGACATGCCTGGATCAGACATGGGGAAGTTCACTCGTATATTGCATTCGGG AAGGGCTGACCAATTGATGAGTGAGATTCCTACTTTTGTTGCTGATCCACTTCCGGAGGGCTTGGATCGGGTAAATATGTTTTCTGCTTCTGCTGTCAGA ATTTTTGGTTATCTTTTCAGCCTTTTCAAACTTGAGTTCCGGTCAATTCCCGACTAATATCGATTTTACAAAACTAGGGATAATAGTATTACAAACTCTT TACATTAGGAGGGAAAATTGAGATAATTGATTGGTTAAAATAACTTCGTTGTATTCCTGACCAAGATCTGACCAAGATTTTCTTATCATGTATCACCGAA TCATAAACAGAGTTTAGTTTTTGTAAAACTGATGAGGAGATCAAACCTTGGCAATAACACTTTGAAATGATAAAGGAAATAGTTGGCTTACATGATAGTA TTGTTTGAATATACTTGATATTTTTATACTATTGATACAACACATTGGCTGTGTAGTGGAGACAGTAAAAACTGAAGAGCAGAAAGATAATATGACAACA TGCAGTAATTTTTTAGCATTTGTAGTAGAACCATATCTTGCATAGCATCATCTTAGTTCAAGAAAAAACCAAGGCCACTGTTTCTTATGCTACTACTAAA GACTGTAAGATATGTGTAACCATTTGGCATTACATGTCTTGGTGGGATCTACACATTATTATCCTTGTGCATTGTATTTTATTGTCTTGTCTGTATCAAA TAATTAAAGCCTCATCATCTGGGAAAATAGAAGAATAGAGATGCAAGTTTCTAACAAATGTTTAGTTATGTTCCTTTTTTGTACTTACATCTTGTTTCCA TCCTTGTCTTTGTCACATGCATTCTGAGTGGAACAGAAAATAAAAACTCGGTGACTTCGTCCTCCCTTTCTCTTTTGCCTTCCTGTTTTTTTTTCTAAGC AAGGTAGTGATATATCAAAAGAGCATCATCCATTTAAGTGTATGTCTTACTGTGAGGATATTCCACATTTTCAAATGTGCCTATGAGTATTTATTAAGCT TTTGCACCAAAGGTGACTCTCGGCTAAGATTTGTATGCCTGGTAAGATCTGAACTTGGAACAGCTTGACTAAGATTTTTTTCATTTCAGTCATATCATAT CATACATATAAAGATGATTAAACTAAAAAACGGTATCAAAGACCGACAAATGGAATCGGATATACTAGTTAACCATTGATCACAGATGCATTTCATACTA GGTAAGCGCATTGTACCTTGTTCCGAAGAACAAAAAGGAAGTTGGTAGACCAATTTAACAATTGCACTTCTCATATCAGTGTATTTTACTTTCACAGGTG CAAGTTTGTTAACTTAACATGTTCCAAATTGTTGACAATCATCAATTTCATCGTCTCTGTGTCGTTCCTTACAAATGATTTTTTGTCCAGGGTTATATTG TCCTAAATAGACCATGGGCTTTTGTTCAGTGGCTGGAGAAAGCAGATATTGAGGAAGAATATATTCTGATGGCAGAACCTGACCACATATTTGTGAATCC TTTGCCTAATTTGGCTTCTAGAACCCAACCAGCCGGGTTTCCATTTTTCTATATAAAACCAGCTGAAAATGAAAAAATAATTAGGAAGTTCTATCCTGAA GAAAAGGGTCCTGTTACTGATGTCGACCCCATTGGCAATTCTCCTGTAATTATTCAAAAGTCTCTGATGGAGGAAATAGCTCCGTCATGGGTGAATATTT CGTTGAGAATGAAAGATGATCCAGAGACTGATAAAGCTTTTGGATGGGTGCTTGAAATGTATGCTTATGCTGTAGCATCTGCATTGCATGGTGTAAAGCA TATTCTTCGAAAAGACTTTATGCTGCAGGTTTGATTCGGTCACGTCGTCTTGTATTTTCATTTTATTCTACCCTCTCTCTTTCCTTTGTAAGAGGCTGAA GCATTATATAAGTTCATAACATGCACTGTTAGAAAATTTCAGCCACCTTGGGACTTACATGTTGGGAAGAAGTTTATCATCCATTATACATATGGATGTG ACTACAACTTGAAGGGGGAACTGACATATGGGAAGATCGGAGAATGGCGATTTGACAAGAGATCTCATCTTACTTCTCCTCCTCCCAAAAACCTTTCCTT ACCCCCTCCAGGAGTTCCTGAAAGTGTGGTGCGGCTTGTAAAGATGGTGAATGAGGCTACTGCAAACATACCTGAATGGGACACATTAAATAGAATCTGA GGGGGAAACATCACAAACCATATTGCCATAGGCCTCTGCTGCTGGTGCTTTAGGAAGAGCACCACAAACAGTAATTACATGCCAAAATAGATGAGTTTGC ACAGAGAGGGGAATTGCAATGAATACAAAGGATGTTTTTGTGCTTTCTTCCACTTTATTCCTTGCGTGCAAAACATGTTACATGACAACATTGATATATT TATTTTTGCCAACTGAATGTTATAAGACTGCAATCAATACAAAAAAAAATCTCGTTCATTGTAACACTCTTTGGGTGTGAGGGAGGATACAAAGACTGTC CTCATACTTGATATGTTAATGAATTGATGAAAGAATTAAAATGTTTAGTATTTTATGAGCCGTACTTCTCAAACAATATATGCAATTCGAACGCATCACT TGTGATGTATAGCATTGTACCTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29552; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106840
| Blastp | Hydroxyproline O-arabinosyltransferase 3 from Arabidopsis with 54.62% of identity |
|---|---|
| Blastx | Hydroxyproline O-arabinosyltransferase 3 from Arabidopsis with 67.04% of identity |
| Eggnog | NA(ENOG410Z627) |
| Kegg | Link to kegg annotations (AT5G13500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459109.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |