| Id Trinity | FTRINITY_DN52967_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_106105 |
| Sequence | AAATATAATTTAAATTTTCTATTTTATAGTTTTGAAGCTCAACATATTTTTTCCTACCTTAAAAATTCAGCTTGAAAACTTTTCTGTTTATGTTTGAAAT ACACCTAGTTACGATTTGACTTGAATTTTGCATTTAACAAATCCTAATTTTCAATTGGAATCAATTCCTTTTAAAAGTGAAAGAAACTTAAATATTTTTT AAATCTAAATAAAAAAACTCCTAAAATACTTTTGATTCCATAGACCGGGTTACAAAACAAGTACAAGGAAGAAGGTTTTGAGAATTGGTAATAACGCGTA AATCTGCGCCAGAGAACAGTGACAGAAGCAGAATCAGGTTAGCGTGTGGCAATGGCGGAAGAGCAAAGTGAGTTGAAGATTTACAACTCCATGACTAATG AGAAAGAGATCTTCAAACCCAAAGAACCAGGCAAGGTTTCCATGTATGTCTGTGGAGTCACCGCTTACGATTATAGCCATATCGGTCACGCTCGTGCCGC TGTTTCTTTCGATATCCTTTTAAGGTACCTTAAACACTCCGGGTATGATGTAACATATGTGCGAAATTTCACCGATGTTGATGATAAGATAATTAAGCGT GCAAATGAGACTGGTGAAGATCCTTTGGAGTTAAGCAACCGTTTTTGTGATGAATATGACCTTGATATGGCTTATCTCCAGTGTGAGAGACCTTCTCGGG CGCCTCGTGTTTCTGCGCACATTGATGAGATAAAGGACATGATAATTCAGATAATCAACAATGGCTATGCATACGAAGTTGATGGTGATGTTTTCTATGC TGTTGAAAAATTCCCAAATTATGGCATGCTGTCTGGACAAAGGCTAGAACATAACAGAGCAGGGGAGCGAGTTGCTGTTGACTCAAGAAAGCACCACCCT GCTGATTTTGCATTGTGGAAGGCGGCTAAACCTGGTGAGCCCTACTGGGACAGTCCTTGGGGTCCTGGAAGACCTGGGTGGCACATTGAGTGCAGTGCAA TGAGTGCTTGTTATTTAACTCATAAATTTGATATTCATGGTGGTGGAATTGATTTAATCTTTCCTCATCATGAAAATGAGATTGCTCAGAGCTGGGCTGT GGACAAAGAGAGCAATATCAGTTATTGGTTGCATAATGGGCACGTCACTAATAATAATGAGAAGATGTCAAAGTCCTTAGGCAACTTTTTCACTATTCGC CAGATCATTGTGCGTTACCATCCGCTTGCATTGAGACACTTTTTGATTAGTGCCCATTATAGATCTCCATTAAATTACTCAATTGCACAGCTGGAGAGTT CATCTGATGCTATTTATTATATATTTCAGGTAAACAATCCATAAATAGTCTCTATCAGAAATTATGAGTTGTTGCTTAGATTTGATGGACGAGTTCATCT CGAGGTTGAACAACTTTTTCAATATGTAATTTGAAATTGTGTATATTTGGGATTGTGTTCCAAGGGATGATGTCACATGTTTTTGTGCATAAAGCAAAGT TTTTTTTATTGGGTTTTGGTGCCAATCTTGTTTAATATGATCCTGATATCCTGTTGCTGGTGGTTTATGCATTTCCGCTATGATGGGAATCTATTGATAT TAAGTATTATAGCTCCAGATACGTATGTCCAACTTAATAGATTTTACTACTCAAGTGAAATTGTTCAAAAACTGGTTATATTTACTTCTGTTATGTTCTT AATTATGAGAAGGATTTTGATCTTTTGGTTGTTAGACTCTTCAAGATTGTAAAGATGCTTTATCATCATTTCAACAAGAGGGCACTGAGGAAAATAAAAA AGCGCCTCAAGTGGAAGAGGCTGCCAAGGAGTGCATTAAGAAGATGCGTATTGAGTTTCAAACCAAAATGTCAGATGACTTACAAACACCTGTAATAATA ACTGGTTCAATCCAAGAGGCCTTGAAATATATCAACAATTGTTTGAAGAAGCTGAAGAAAAAGATGCAGAAAAGGGCACAGTTGCAATTGATTCAATCAC TAATTGAAGTTGAGAAAGAAATTGGAAAAGTTCTGGACGTACTAGGATTTTTGTCCTCTAAATCCTATGTCGAGATTCAATCACGAATTGACGTTGACAA AGATATTGGAAAAGTTCTGGATTTAGTTGGGTCATTGCCCACTAACTCCTATGCTGAGGTTCTGAAGGAGTTGAAAGACATGGCATTGAAGAGAGCAGGT TTAACAGAGGATGAAGTACTAAGTCTGATAGAAGAAAGAACTCAAGCAAGGAATAATAAGGATTTTCCTAAGAGTGATAAGATTAGGACTGATTTAACTG CTAAAGGCATAGCACTTATGGATGTTGGCACTGAAACAATTTGGAGACCATGTATCCCAAGTGAACCACTTGAAGCCGAAGTTGTACAGAAGGCACATAT AGTTGAAGAAAAACAGTCGACACCTCCGGTGAATCAAAAAGTGGAGGGAGAAGGGAATGGGCCAAATACTGCATCAACATGAAGGTGGGTCAATGTCCCC TCCATATAGCTACAATTGATACAGAACTATTAGTAATTTATGAATATTGTGACATTAGAAGGCTTCATTTGTATAACAGTTACAGGCTATAAGACAAAGT TCCTTGGTGTGTAGGACGTGAAACATTTCACATTTTCGCTCTTTTGGACCCTTTGATTATATGAACAGAGCCTCATACAGATATGGTTTTTTTAAGAGTC AAATTATTTAAACATCAAGTTCTTAATATCACATTTAATAGCGTATACATTTTTTTCTATCTCTAATGTACTTTTATCTTATCTGGATACATGGATCCTG GA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29557; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106105
| Blastp | Cysteine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 70.72% of identity |
|---|---|
| Blastx | Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 70.03% of identity |
| Eggnog | Cysteinyl-tRNA synthetase(COG0215) |
| Kegg | Link to kegg annotations (AT2G31170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428592.1) |
| Pfam | tRNA synthetases class I (C) catalytic domain (PF01406.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |