Ll_transcript_106108

• Id Trinity: FTRINITY_DN52967_c0_g1_i5
• Name Transcript: Ll_transcript_106108
• Sequence: GTTTTGAGAATCAGTAACATTGAGAGCGTGTGACAATGGCGGAAGAGAAAAGTGAGTTGAGGATTTACAATTCCATGACTAATGAGAAAGAGATCTTCAA ACCCAAACAACCTGGCAAGGTTTCAATGTATGTTTGTGGTGTCACTGCTTACGATTATAGCCACCTTGGTCACGCTCGTGCCGCCGTTTCTTTCGATATC TTCTTCAGGTACCTTAAACACTTAGGGTATGAGGTAACATATGTGCGGAATTTCACCGATGTTGATGACAAGATAATTAAGCGGGCAAATGAGACCGGTG AAGATCCTTTGAACTTGAGCAACCGTTTTTGCGATGAATATGATCTTGATATGACTTATCTTCAGTGTGAGAGCCCGTCTCGGGTGCCTCGTGTTTCTAC GCACATTGGCGAGATAAAGGACATGATAACTCAGATCATCAACAATGGCCATGCTTATGAAGTTGATGGTGATGTTTTCTATGCTGTTGAAAAATTCCCA AATTATGGCATGCTGTCTGGACAAAGGCTAGAACATAATAGAGCTGGGGAACGAGTTGCTGTTGACTCAAGAAAGCGTCACCCTGCTGATTTTGCATTGT GGAAGGCTGCTAAGCCTGGTGAGCCTTCTTGGGACAGTCCTTGGGGTCCTGGAAGACCAGGGTGGCACATTGAATGCAGTGCAATGAGTGCTTGTTATTT AACTCATAAATTTGATATTCATGGTGGTGGAATTGATCTGATCTTTCCACATCATGAAAATGAGATTGCCCAGAGCTGGGCTGTGGACAACGAGAGCAAT GTCAGTTATTGGTTGCATAACGGGCACGTCACTAATAATAATGAGAAGATGTCAAAGTCCTTGGGCAACTTTTTCACTATTCGTCAGATTATTGAGCGTT ATCATCCGCTTGCATTGAGACACTTTTTGATCAGTGCCCATTACAGATCTCCATTAAATTATTCAGTGGCACAGCTGGAGAGTTCATCTGATGCTGTTTA TTATATATTTCAGACTCTTCAAGATTGCAAAGATACTTTATCATCACTTCAACAAGAGGGCACCGATGAAAAGAAAAATGTTCCTCAAGCTGAAGAGGCA GCCAAGGAATGCATTAAGAAGCTGCGTATCGAGTTTCAAACCAAAATGTCAGATGATTTTCAAACACCAGTAATAATAACTGGTTCTCTCCAAGAGGCCT TGAAATATATCAACACTTCTTTGAAGAAGCTGAAGAAAAAGATGCAGAAAAGGGCACAGTTACAATTGATTCAATCACTAATTCAAGTTGAGAAAGAAAT TGGAGAAGTTCTCGACTTACTAGGATTTTTGTCCTCCAAATCCTATGCCAAGATTCAATCACAAATCGAAATTGAGAAAGATATCGCGAAAGTTCTGGGC TCACTAGGATCAATTCCAACTAATTCCTATGCCGAGGTTCTGCAGGAGTTGAAAGACAAGGCATTGAAGAGAGCAGATTTGGCAGAAGATGAAGTACTAA GTCTGATAGAAGAAAGAACTCAAGCAAGGCTTAATAAGGATTTTCCTAAGAGTGATAAGATTAGGACTGATTTAACTGCTAAAGGCATTGCACTAATGGA TGTTGGAAATGAAACAATTTGGAGACCATGCATCCCAAGTGAACCACTTGCAGCAGAAGTTACACAGAAGGCACCTATAGTTGAAGAAAAACAATCAACA CCAACAGTGGATAAAAAAGTGGAGCAAGAAAGGAATGTGCCACAAACTGCATCAACATGAGGGTTGATCAATGTCACTCCACATAGCTATGATTTATATA GAACTGTTTAATAATTTATCAATGTTGTGACATGAGGAAGCTTCATTTGTATAACAGGTGCATGCTAAGACAAAGTGCCTTGGTGTTTAGGACTTGGAAT CATTTTACAATTTTACTCATTTTTGGGGTGCTATATATGTTTGGCCTGTTAAACATGTCAACTCAATCATGTCTCTACCTGGATTACGGTGATTGAGAAG TGATAGTAAAAATAAAAATAACTTATAAATGATGATGGGTGATGTACAAATTTTGGATGATGGTTAGAAGTGATAATAAATTAGTGCTTGTGTTGAACAA TTGTTTCGAAGTAGTATTGGCACTCGTATTCGAGTTCATCGGAGGAAGTTGTTGAATCCGATGCTGCATCGGCTTTAGGTGCACATTGGGGAAGTGAGGA TCAATTGAGAGTGTGAACTGGTTATTTTTTGAAGAATCCAGGGCTGTGAAAGGTTTCAGAGTATGTGTTTATTTAT
• Tissue: flowers
• Gene name: LI_gene_29557;
• Additional information: details;

Expression of Ll_transcript_106108

FPKM

• FPAB: 7.6
• FPNAB: 17.6
• LF1: 14.9
• LF2: 11.1
• LF3: 10.5
• LF4: 12
• UF1: 14.4
• UF2: 13.3
• UF3: 10.2
• UF4: 9.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_106108

• Blastp: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 60.63% of identity
• Blastx: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 60.45% of identity
• Eggnog: Cysteinyl-tRNA synthetase(COG0215)
• Kegg: Link to kegg annotations (AT5G38830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453015.1)
• Pfam: tRNA synthetases class I (C) catalytic domain (PF01406.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;