Ll_transcript_106110

• Id Trinity: FTRINITY_DN52967_c0_g1_i7
• Name Transcript: Ll_transcript_106110
• Sequence: GTTTTGCTGGATTTCTAATTGTTATCTACCCTTTCCTTTGTTTTGTATTATCTTCTATCGGAAAGTTTTAGGTTGTATTCAGAAATATATTTATATTCAG TCTCTCATTAGCTTCTATTTGAGGGCAAGCTTGGGCGCAATTGTATGATTGATTGCCTTGTGAACCGAAGGTCGTAAGTTCAAATATTTGAAACAACCTC ATCTTTTGTCAGGGTAAGGTTACGTACATCTATCCTCCTCAGACCCTACATGGTGGGAGCCCCTGCACTGGGCTGCCTAGTCTCTTATTAACTAGAACTC TGCCTTATGTTGTTTTAAAGTAGGTCATTCACCATTTGATGTACATCCTCTGCCTGCTATACGACTTTAGTGTTTGGGGGCGTCATCCTTTGTGATAACT GATAATAGTTCAAAGGCCTGTCTTTATATTGGGTTTTCTTTAATCCTGATCTGTCTTTGTTGTTGCTATTATTTATTCTTAATACATGACATAATTGTAC CCCCAATGTTGTAAATTTCATCTCTTTCATTTGTCCTACAAAACATACCCCTTGATTCCTTTAACCTGTGTCATTTTGCAAGAGTTTGTTATCTGGCTGT TCAATGCTGATTAGAGGCTGCTAAAATTTGAATTGTTGCAGATAATTAAGCGTGCAAATGAGACTGGTGAAGATCCTTTGGAGTTAAGCAACCGTTTTTG TGATGAATATGACCTTGATATGGCTTATCTCCAGTGTGAGAGACCTTCTCGGGCGCCTCGTGTTTCTGCGCACATTGATGAGATAAAGGACATGATAATT CAGATAATCAACAATGGCTATGCATACGAAGTTGATGGTGATGTTTTCTATGCTGTTGAAAAATTCCCAAATTATGGCATGCTGTCTGGACAAAGGCTAG AACATAACAGAGCAGGGGAGCGAGTTGCTGTTGACTCAAGAAAGCACCACCCTGCTGATTTTGCATTGTGGAAGGCGGCTAAACCTGGTGAGCCCTACTG GGACAGTCCTTGGGGTCCTGGAAGACCTGGGTGGCACATTGAGTGCAGTGCAATGAGTGCTTGTTATTTAACTCATAAATTTGATATTCATGGTGGTGGA ATTGATTTAATCTTTCCTCATCATGAAAATGAGATTGCTCAGAGCTGGGCTGTGGACAAAGAGAGCAATATCAGTTATTGGTTGCATAATGGGCACGTCA CTAATAATAATGAGAAGATGTCAAAGTCCTTAGGCAACTTTTTCACTATTCGCCAGATCATTGTGCGTTACCATCCGCTTGCATTGAGACACTTTTTGAT TAGTGCCCATTATAGATCTCCATTAAATTACTCAATTGCACAGCTGGAGAGTTCATCTGATGCTATTTATTATATATTTCAGACTCTTCAAGATTGTAAA GATGCTTTATCATCATTTCAACAAGAGGGCACTGAGGAAAATAAAAAAGCGCCTCAAGTGGAAGAGGCTGCCAAGGAGTGCATTAAGAAGATGCGTATTG AGTTTCAAACCAAAATGTCAGATGACTTACAAACACCTGTAATAATAACTGGTTCAATCCAAGAGGCCTTGAAATATATCAACAATTGTTTGAAGAAGCT GAAGAAAAAGATGCAGAAAAGGGCACAGTTGCAATTGATTCAATCACTAATTGAAGTTGAGAAAGAAATTGGAAAAGTTCTGGACGTACTAGGATTTTTG TCCTCTAAATCCTATGTCGAGATTCAATCACGAATTGACGTTGACAAAGATATTGGAAAAGTTCTGGATTTAGTTGGGTCATTGCCCACTAACTCCTATG CTGAGGTTCTGAAGGAGTTGAAAGACATGGCATTGAAGAGAGCAGGTTTAACAGAGGATGAAGTACTAAGTCTGATAGAAGAAAGAACTCAAGCAAGGAA TAATAAGGATTTTCCTAAGAGTGATAAGATTAGGACTGATTTAACTGCTAAAGGCATAGCACTTATGGATGTTGGCACTGAAACAATTTGGAGACCATGT ATCCCAAGTGAACCACTTGAAGCCGAAGTTGTACAGAAGGCACATATAGTTGAAGAAAAACAGTCGACACCTCCGGTGAATCAAAAAGTGGAGGGAGAAG GGAATGGGCCAAATACTGCATCAACATGAAGGTGGGTCAATGTCCCCTCCATATAGCTACAATTGATACAGAACTATTAGTAATTTATGAATATTGTGAC ATTAGAAGGCTTCATTTGTATAACAGTTACAGGCTATAAGACAAAGTTCCTTGGTGTGTAGGACGTGAAACATTTCACATTTTCGCTCTTTTGGACCCTT TGATTATATGAACAGAGCCTCATACAGATATGGTTTTTTTAAGAGTCAAATTATTTAAACATCAAGTTCTTAATATCACATTTAATAGCGTATACATTTT TTTCTATCTCTAATGTACTTTTATCTTATCTGGATACATGGATCCTGGA
• Tissue: flowers
• Gene name: LI_gene_29557;
• Additional information: details;

Expression of Ll_transcript_106110

FPKM

• FPAB: 0.5
• FPNAB: 0
• LF1: 0
• LF2: 0.1
• LF3: 0.1
• LF4: 0.3
• UF1: 0.1
• UF2: 0.2
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_106110

• Blastp: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 58.47% of identity
• Blastx: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 59.17% of identity
• Eggnog: Cysteinyl-tRNA synthetase(COG0215)
• Kegg: Link to kegg annotations (AT5G38830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428592.1)
• Pfam: tRNA synthetases class I (C) catalytic domain (PF01406.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;