Ll_transcript_106111

• Id Trinity: FTRINITY_DN52967_c0_g1_i8
• Name Transcript: Ll_transcript_106111
• Sequence: AAATATAATTTAAATTTTCTATTTTATAGTTTTGAAGCTCAACATATTTTTTCCTACCTTAAAAATTCAGCTTGAAAACTTTTCTGTTTATGTTTGAAAT ACACCTAGTTACGATTTGACTTGAATTTTGCATTTAACAAATCCTAATTTTCAATTGGAATCAATTCCTTTTAAAAGTGAAAGAAACTTAAATATTTTTT AAATCTAAATAAAAAAACTCCTAAAATACTTTTGATTCCATAGACCGGGTTACAAAACAAGTACAAGGAAGAAGGTTTTGAGAATTGGTAATAACGCGTA AATCTGCGCCAGAGAACAGTGACAGAAGCAGAATCAGGTTAGCGTGTGGCAATGGCGGAAGAGCAAAGTGAGTTGAAGATTTACAACTCCATGACTAATG AGAAAGAGATCTTCAAACCCAAAGAACCAGGCAAGGTTTCCATGTATGTCTGTGGAGTCACCGCTTACGATTATAGCCATATCGGTCACGCTCGTGCCGC TGTTTCTTTCGATATCCTTTTAAGGTACCTTAAACACTCCGGGTATGATGTAACATATGTGCGAAATTTCACCGATGTTGATGATAAGATAATTAAGCGT GCAAATGAGACTGGTGAAGATCCTTTGGAGTTAAGCAACCGTTTTTGTGATGAATATGACCTTGATATGGCTTATCTCCAGTGTGAGAGACCTTCTCGGG CGCCTCGTGTTTCTGCGCACATTGATGAGATAAAGGACATGATAATTCAGATAATCAACAATGGCTATGCATACGAAGTTGATGGTGATGTTTTCTATGC TGTTGAAAAATTCCCAAATTATGGCATGCTGTCTGGACAAAGGCTAGAACATAACAGAGCAGGGGAGCGAGTTGCTGTTGACTCAAGAAAGCACCACCCT GCTGATTTTGCATTGTGGAAGGCGGCTAAACCTGGTGAGCCCTACTGGGACAGTCCTTGGGGTCCTGGAAGACCTGGGTGGCACATTGAGTGCAGTGCAA TGAGTGCTTGTTATTTAACTCATAAATTTGATATTCATGGTGGTGGAATTGATTTAATCTTTCCTCATCATGAAAATGAGATTGCTCAGAGCTGGGCTGT GGACAAAGAGAGCAATATCAGTTATTGGTTGCATAATGGGCACGTCACTAATAATAATGAGAAGATGTCAAAGTCCTTAGGCAACTTTTTCACTATTCGC CAGATCATTGTGCGTTACCATCCGCTTGCATTGAGACACTTTTTGATTAGTGCCCATTATAGATCTCCATTAAATTACTCAATTGCACAGCTGGAGAGTT CATCTGATGCTATTTATTATATATTTCAGACTCTTCAAGATTGTAAAGATGCTTTATCATCATTTCAACAAGAGGGCACTGAGGAAAATAAAAAAGCGCC TCAAGTGGAAGAGGCTGCCAAGGAGTGCATTAAGAAGATGCGTATTGAGTTTCAAACCAAAATGTCAGATGACTTACAAACACCTGTAATAATAACTGGT TCAATCCAAGAGGCCTTGAAATATATCAACAATTGTTTGAAGAAGCTGAAGAAAAAGATGCAGAAAAGGGCACAGTTGCAATTGATTCAATCACTAATTG AAGTTGAGAAAGAAATTGGAAAAGTTCTGGACGTACTAGGATTTTTGTCCTCTAAATCCTATGTCGAGATTCAATCACGAATTGACGTTGACAAAGATAT TGGAAAAGTTCTGGATTTAGTTGGGTCATTGCCCACTAACTCCTATGCTGAGGTTCTGAAGGAGTTGAAAGACATGGCATTGAAGAGAGCAGGTTTAACA GAGGATGAAGTACTAAGTCTGATAGAAGAAAGAACTCAAGCAAGGAATAATAAGGATTTTCCTAAGAGTGATAAGATTAGGACTGATTTAACTGCTAAAG GCATAGCACTTATGGATGTTGGCACTGAAACAATTTGGAGACCATGTATCCCAAGTGAACCACTTGAAGCCGAAGTTGTACAGAAGGCACATATAGTTGA AGAAAAACAGTCGACACCTCCGGTGAATCAAAAAGTGGAGGGAGAAGGGAATGGGCCAAATACTGCATCAACATGAAGGTGGGTCAATGTCCCCTCCATA TAGCTACAATTGATACAGAACTATTAGTAATTTATGAATATTGTGACATTAGAAGGCTTCATTTGTATAACAGTTACAGGCTATAAGACAAAGTTCCTTG GTGTGTAGGACGTGAAACATTTCACATTTTCGCTCTTTTGGACCCTTTGATTATATGAACAGAGCCTCATACAGATATGGTTTTTTTAAGAGTCAAATTA TTTAAACATCAAGTTCTTAATATCACATTTAATAGCGTATACATTTTTTTCTATCTCTAATGTACTTTTATCTTATCTGGATACATGGATCCTGGA
• Tissue: flowers
• Gene name: LI_gene_29557;
• Additional information: details;

Expression of Ll_transcript_106111

FPKM

• FPAB: 15.7
• FPNAB: 12.5
• LF1: 15.1
• LF2: 17.2
• LF3: 15.1
• LF4: 12
• UF1: 11.3
• UF2: 17.4
• UF3: 12.4
• UF4: 6.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_106111

• Blastp: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 61.19% of identity
• Blastx: Cysteine--tRNA ligase 2, cytoplasmic from Arabidopsis with 61.01% of identity
• Eggnog: Cysteinyl-tRNA synthetase(COG0215)
• Kegg: Link to kegg annotations (AT5G38830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428592.1)
• Pfam: tRNA synthetases class I (C) catalytic domain (PF01406.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;