| Id Trinity | FTRINITY_DN52973_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_106391 |
| Sequence | TATTTTCTCACTTTATAATGAACACCATTTTTAATAAAACCCAATTAAGACAAGTAACCATGAAATAAGTATTACTACCATCTTTTATTTTTTTTCATCT TGTAAGAAAAAATGAAACTTGTAACGGTTAAGTTGTAATAATTATTTACTTTGAAATTTTATTTTTTGCGGTATTATTTAATTATTTATATCACACAGTA CTATCTTCTTTCTCATCATATAAACTTTTCAGAATCAAATTCTAAAAGCATAAATAATAGTTTCTTTGCAACCCTGCGTTTTGCTCTTCAGGTTGATTTT GTGGAGAAAGTTTTGATCTTTTGTGATGGGTATGGTTGAAACTCGATCTAAGGCACCATCTGAGGGAACATCATCTTCAGAAGAAGAAGAAAATAGTGTT CAAGGTTCAGAGATTGAGGAGAAGGAGCTTAGTGAAGAAGTTCTTGGTGCTTTGAAAGAAGAGGAAGGAGGTTCCGGGGTTCCGGAAAATGGGGTTGGAT TTTCTAGCATTCAGAACCATGGTTTGGGTGGTGATGGGGTTGTTGAAGTTGTTAAGAGCAGGGTTTCCGAGACCAAGGTTTCAGTTCCGAGGGGAAATGA TTCTCAAGGTTCAGCTGATTGTGAGATGAATGGCGCATCGCCTTTGTTGGAAATGCAAGGAAGTGGTGCATGCACAGTGTTTGCTGGTGGTGATGGTGTG AGTGAGAGAAGGGATGGGAAGAAAAGTGAGGAGGAAGAAAAAGATGAAGATTGTGATGGTAAAATTGTGAGCAATGATGTTCCGGATATGGAGACGGGTG AGAAAGTGGATGTGGAGTCGGAGGATCTAAGTGATGAAGGATATGAGTTTTCTGTTGGTGATTTCGTTTGGGGTAAAATCAAGAGTCACCCATGGTGGCC TGGCCGGATTTACAACCCTTCTGATGCGTCAGACCTTGCTTTGAAGCTGAAACAAAAGAATCGGCTCCTTGTTGCGTACTTTGGTGATGGAACCTTTGCT TGGTGCCATCCATCACAGTTGAAGCCATTTGAGGCGAACTTTGAGGATATGGTGAAACAAAGTAGCTCCAAAGCTTTCGTCAATTCTGTACAAAAAGCTG TAAACGAGGTTGGAACGCTTCTGTATTTGAAGATAAGTCATCCATTTGCTGCAAAGAAAACCAGGTCCGAGTTCGCTCCACCTATGGCGAAGAATTCTGG AATCAAGGAAGGTGTTCTTGTTCCTGAAAAAGGTATAGAGCGGTTTTCAGTTGTTGCAATTGAACCAACGGAATTACTTTCTCAAGTGAAACGAACCGCG GAAGTTATTGCCATTGCTAGTGTTCTGGAGTTGGAAATATTAAAGGCCCAGCTTTCGGCCTTTTATCTATCAAGAGGAGGTTATAAGTTACCTACTTATG AGGATCCGCAACCAGTTCCTGGACTTGAAGATAGTTCAATGGCTACAACAGTGAATAGAGGTAATGGTGCGGTGGAAGCACCATTCCAAGGGCCATATGG TGAATTGTGTCGTTCTCCTGGACTTTCAGGAAATCGATCTAACTTCGGAAGGAAGCAGAAAAGCATTGCTCAAATTTTGGGGGAGGACAAAGATGTTGCG GAGGGGGAAGCATCCGATGACGTGATTGATGCAACTGTTTCAACTGGTAGAAAGAAGAGGAAAAACAGTGAGGATTATGCTGATAGAAATATGCCGAGTG CTGAAAATAATGGCAGATCTTTGCGGTCAAAAGAAAAGAAAGAAGTTGTCGGCAATGAAAACATTAGCGGTGGAAGCCAAAAGGAAACTGAAGAAGGAAT GAAAACCAAAGAACAAAATGAGAAGGGTTACGTGTCAAGAGAAAGAAAGAAAAGTAAGTACTTGTCCCCTCCCTTCACTTCTCCAGTCACGGGGCAATGG AAGGGAGACTTCGAAACTGAATCTCTCGAATTTTCCAATGAAGCTGAAGAGTCGAAAGGAATGGCTAATTGTGGGGTGGCATTTGAGGACAGTTTCTCGG ACGAAGTTGCCATTGAGTGGGAGCTTTCTGATGGCTCTAACTACAACAAAGAAGATGATAAGAAAAAAATTATTGATCTGACAAATATCCATATTCCTTC GGAGGAAGTTCTGTCCGAAGCCCACTATGCTGCTGTTAATCCACAGTCTCCTGGGGAAAGCACTTCTCTTGAAAAAAACTGTGGACTTTATTTCTGCCTT TAGAAGCTCATTATTTCTACGAGGGTCACACTACAAAGTATACAACAAGCGCAGACCTGAAAGGAAGAGAAATACAGATCAAAATCAAACTGAGCATGTA TCACACAATCATGACTCCGAGCCAAGGAAGAGAAGAAAGGAGAAAAGTCCAGGAACTAACACTGTCAAGGATGGAAGTGGTGATGAAAATGGTTCAGCCG CTGCACTTTTCGTGTCATTCTATCCATTATCAACTCTACCTTCAAAATCTGATCTGATCAATGTGTATAGCAAGTTTGGAGCTCTGAACGAAGCAGAAAC AGAAATGTTCCGGACTAATTACACTGCTCGAGTGTCCTTCCTCAGAACTTCTGATGCCGAAAAGGCATTGAAGGATTCTGAAAAGTCGAATCCTTTTGAA CCTTCTGAGGTTACTTTCCAGCTTCAGTATCTTTCTGCTGGATCAAAGTCTCTAGAACGCGGTGAAAGATCAAAGTTCAAACCTTCAGCTGCAGCAGCCA AGAAGAAAGGCAAGACTCCCCCAATCACACCACCTGTTTCACTTTCATGGGGTAATGAAGCATCCAAATTGAACTACATAAAACAAAAACTCGAAGGTGT GACCTCAATGATAGAAGCATCAGATGGCAAATCACCCGATACGAAGACAACATTGTTGAGCGAGGTGAAAGGTCTTTGGGAGGATGTGAGCAAGATGGTT GAATCTTCATCATAGATAACACATTTGGAGAATGATAACTATGTAGCTAATGATATCATGATACCCACGTGAACCCGTGGATGTTCCCGGCTCGGACAAG ATTGCCTCCAGTGCGAGGATACCTGTGAGGAACCAAAAAAAAGATACCCACGTGAAGCATATAGCATAGACTTTAATGCTCTTTGTATAAAGTGTACCCT TCTTTTCTTTTTGTGTTGTATATTTTGGATCTATGCATTTAACTTGTGGGGACCTTTATCTCATCCTTTCCAATAATTATAATATAAAAACAAACAATAA CCAACâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_29606; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106391
| Blastp | Serine/threonine-protein kinase ATM from Arabidopsis with 29.02% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase ATM from Arabidopsis with 29.02% of identity |
| Eggnog | ataxia telangiectasia mutated(ENOG410XNPY) |
| Kegg | Link to kegg annotations (AT3G48190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442558.1) |
| Pfam | PWWP domain (PF00855.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |