Ll_transcript_106412

• Id Trinity: FTRINITY_DN52973_c1_g1_i6
• Name Transcript: Ll_transcript_106412
• Sequence: TATATTGATTTATTTCACTATCTTATGTAAAAGTAGTACAATTTTGCTTTTGTTTTCATTTTCCATTGTGGGTAATGTTCTAGCTATATTTAGTCTTAAG CCAAAACCCTAGAAATCTATTGATTTTTATTTTGTATTTTTTGTTTTTGTTTTTTATTTATTTGGTATGATTTTGTCAGAAAAGGTTGATTTTGTGGAGA AAGTTTTGATCTTTTGTGATGGGTATGGTTGAAACTCGATCTAAGGCACCATCTGAGGGAACATCATCTTCAGAAGAAGAAGAAAATAGTGTTCAAGGTT CAGAGATTGAGGAGAAGGAGCTTAGTGAAGAAGTTCTTGGTGCTTTGAAAGAAGAGGAAGGAGGTTCCGGGGTTCCGGAAAATGGGGTTGGATTTTCTAG CATTCAGAACCATGGTTTGGGTGGTGATGGGGTTGTTGAAGTTGTTAAGAGCAGGGTTTCCGAGACCAAGGTTTCAGTTCCGAGGGGAAATGATTCTCAA GGTTCAGCTGATTGTGAGATGAATGGCGCATCGCCTTTGTTGGAAATGCAAGGAAGTGGTGCATGCACAGTGTTTGCTGGTGGTGATGGTGTGAGTGAGA GAAGGGATGGGAAGAAAAGTGAGGAGGAAGAAAAAGATGAAGATTGTGATGGTAAAATTGTGAGCAATGATGTTCCGGATATGGAGACGGGTGAGAAAGT GGATGTGGAGTCGGAGGATCTAAGTGATGAAGGATATGAGTTTTCTGTTGGTGATTTCGTTTGGGGTAAAATCAAGAGTCACCCATGGTGGCCTGGCCGG ATTTACAACCCTTCTGATGCGTCAGACCTTGCTTTGAAGCTGAAACAAAAGAATCGGCTCCTTGTTGCGTACTTTGGTGATGGAACCTTTGCTTGGTGCC ATCCATCACAGTTGAAGCCATTTGAGGCGAACTTTGAGGATATGGTGAAACAAAGTAGCTCCAAAGCTTTCGTCAATTCTGTACAAAAAGCTGTAAACGA GGTTGGAACGCTTCTGTATTTGAAGATAAGTCATCCATTTGCTGCAAAGAAAACCAGGTCCGAGTTCGCTCCACCTATGGCGAAGAATTCTGGAATCAAG GAAGGTGTTCTTGTTCCTGAAAAAGGTATAGAGCGGTTTTCAGTTGTTGCAATTGAACCAACGGAATTACTTTCTCAAGTGAAACGAACCGCGGAAGTTA TTGCCATTGCTAGTGTTCTGGAGTTGGAAATATTAAAGGCCCAGCTTTCGGCCTTTTATCTATCAAGAGGAGGTTATAAGTTACCTACTTATGAGGATCC GCAACCAGTTCCTGGACTTGAAGATAGTTCAATGGCTACAACAGTGAATAGAGGTAATGGTGCGGTGGAAGCACCATTCCAAGGGCCATATGGTGAATTG TGTCGTTCTCCTGGACTTTCAGGAAATCGATCTAACTTCGGAAGGAAGCAGAAAAGCATTGCTCAAATTTTGGGGGAGGACAAAGATGTTGCGGAGGGGG AAGCATCCGATGACGTGATTGATGCAACTGTTTCAACTGGTAGAAAGAAGAGGAAAAACAGTGAGGATTATGCTGATAGAAATATGCCGAGTGCTGAAAA TAATGGCAGATCTTTGCGGTCAAAAGAAAAGAAAGAAGTTGTCGGCAATGAAAACATTAGCGGTGGAAGCCAAAAGGAAACTGAAGAAGGAATGAAAACC AAAGAACAAAATGAGAAGGGTTACGTGTCAAGAGAAAGAAAGAAAAGTAAGTACTTGTCCCCTCCCTTCACTTCTCCAGTCACGGGGCAATGGAAGGGAG ACTTCGAAACTGAATCTCTCGAATTTTCCAATGAAGCTGAAGAGTCGAAAGGAATGGCTAATTGTGGGGTGGCATTTGAGGACAGTTTCTCGGACGAAGT TGCCATTGAGTGGGAGCTTTCTGATGGCTCTAACTACAACAAAGAAGATGATAAGAAAAAAATTATTGATCTGACAAATATCCATATTCCTTCGGAGGAA GTTCTGTCCGAAGCCCACTATGCTGCTGTTAATCCACAGTCTCCTGGGGAAAGCACTTCTCTTGAAAAAACTGTGGACTTTATTTCTGCCTTTAGAAGCT CATTATTTCTACGAGGGTCACACTACAAAGTATACAACAAGCGCAGACCTGAAAGGAAGAGAAATACAGATCAAAATCAAACTGAGCATGTATCACACAA TCATGACTCCGAGCCAAGGAAGAGAAGAAAGGAGAAAAGTCCAGGAACTAACACTGTCAAGGATGGAAGTGGTGATGAAAATGGTTCAGCCGCTGCACTT TTCGTGTCATTCTATCCATTATCAACTCTACCTTCAAAATCTGATCTGATCAATGTGTATAGCAAGTTTGGAGCTCTGAACGAAGCAGAAACAGAAATGT TCCGGACTAATTACACTGCTCGAGTGTCCTTCCTCAGAACTTCTGATGCCGAAAAGGCATTGAAGGATTCTGAAAAGTCGAATCCTTTTGAACCTTCTGA GGTTACTTTCCAGCTTCAGTATCTTTCTGCTGGATCAAAGTCTCTAGAACGCGGTGAAAGATCAAAGTTCAAACCTTCAGCTGCAGCAGCCAAGAAGAAA GGCAAGACTCCCCCAATCACACCACCTGTTTCACTTTCATGGGGTAATGAAGCATCCAAATTGAACTACATAAAACAAAAACTCGAAGGTGTGACCTCAA TGATAGAAGCATCAGATGGCAAATCACCCGATACGAAGACAACATTGTTGAGCGAGGTGAAAGGTCTTTGGGAGGATGTGAGCAAGATGGTTGAATCTTC ATCATAGATAACACATTTGGAGAATGATAACTATGTAGCTAATGATATCATGGTAAAGTGACAATATGCCATTTAGTTTTCTATATCTATCTTTTTCTGA GGATGTCTATTTGACTCTTAGCCTAGTTTATATATGACATAAAATTACTCAGCATAGCCAGGTTCAGTTATAAGTTGAGCCTCGGCGTATCCTGGTTAAA GTTCCGCTGCATGGCAACGGGGTTACAGGTTCGATTGTCGAATCAAGGGTCCGGCCCTTCTTTAGACCCTGCGGATAGCGAGAGCTTTATAGGACCAGGA TGTCTTTTTATATAATATGGGTTATTATGATGTCAAGTTGTGGTTTAGGATATGTAACCTATTGCATACATTGTGTGTAACTCTATATGGAGATTAACAT GTTTAGATTGTTCAGTCTGTTATTGTAGTTTATGCAAACAGCTTTAAGGATCAAAATATGGTTCCTGTTTTCTTTTTTAAGAATGTCTTATGTTAAATAC TTCATTTTGGGTCAAATGAGTTTCTTTATGATATTGATTTTATGCACTTGGAACTAAAATATATGAAAAAGTAG
• Tissue: flowers
• Gene name: LI_gene_29606;
• Additional information: details;

Expression of Ll_transcript_106412

FPKM

• FPAB: 6.1
• FPNAB: 8.8
• LF1: 6
• LF2: 5.6
• LF3: 8
• LF4: 6.4
• UF1: 6
• UF2: 6.4
• UF3: 5.5
• UF4: 7.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_106412

• Blastp: Serine/threonine-protein kinase ATM from Arabidopsis with 29.02% of identity
• Blastx: Serine/threonine-protein kinase ATM from Arabidopsis with 29.02% of identity
• Eggnog: ataxia telangiectasia mutated(ENOG410XNPY)
• Kegg: Link to kegg annotations (AT3G48190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442558.1)
• Pfam: PWWP domain (PF00855.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;