| Id Trinity | FTRINITY_DN52981_c0_g1_i25 |
|---|---|
| Name Transcript | Ll_transcript_106528 |
| Sequence | ATTATTAAATCGCTTATTACCTTAACTTCAACCTCAGCTTCTTTTTTCTCACTAAATGGAACCCTTATCTCTTTTACTTCTATAAATGGACCTTTCTACG TTTCTCACTTTCAAATCACTTTCCAATCCTTCACCGTTTCCATTTCCTTCGCTTCCATCTCTTCGCCACCGCAACTATGCCTTCCGTTCGCGTCGCATTT CGAAGCCGTTTGTTCGGATCACCATGTGTTTGGAGAAACGTTCATCGTCCAACGGTTATCGCCAAACCAAATCCGATTTCGTTGATGTCGTTGGAATTGG TAGCAGGAAGGACGCGGTTCTAGATTTCTGCTTGAATTCCAAGTTTCAGTTAGCGTCGCTTCGATTTTGGAATATCCTTATGAAAGAATCACAAGAGGCA CAATTACAACAAAGGCCAATTGAAGAATATTGTCCAAGAATTGTCAAGGCTCCAATATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCAAGTG CAGGATATGGATTGGACCACACTGTTGCAGTTGATATTTTTGAAACTGTAAGGTCCAGAAATGGATCAACGGTTGCTATAGTTTTGAAACCTTTTAACTT TGAAGGGCTAAGACGGCAAGACGAGGTGAAAGCTCTGCTGGGGAAACTTAAGGCCAACACAGATTTACTTATTGAAATTGATATTGACGCACTGCTCAAA AAAGACTTGTTGACTCTTGATGAGGCTATGAAGACTACCAATGATGCAGTTTTGCTGGCTATTAAGGCCATATTTATTTTAAAATCTGAGATGCACAAAA AACTTATACACAGATTGCATGATGGCATGAAAGAAGCTAGCACTTCAGAAGTTAATAAAATATTGGGGTGCTATAAAGAAGCAGAAATTGGATTTGGAGC TGCATATAACATCGAAACTTCAATTTTGAACTCTATATTTGATTGTCCTTTCCTTGGTGTTCGTTTGAAGGATCCAAATAGCATAGTTATATGCATTCTC GCAAGTTCAGTACCCATCAATGATAGTGATATAGCGGCCTTTGTGGGTACTTTCCGTCAAACAACAGAATACAAAAGAGACATCATACTATCAACAGTCC ATGAGCCTAATGTTGAGCCCAACCAACTGATAACAACAGTCCTTACACTTGGGTAAGTATCGTACTTACAAATAGTAATGATTGTAGGTAACTTCAGCTC CAATGTTTATATTGAAAACATGTGTTTTTTTCTTCCTTCCAACAATGCATTGAGTTTTTTTTTGAATTTGATTGCATTATCCCACTCTCCTTCATATTTT AGGTTGTTGGTTGAGATTGAGCATGATTTATCTTTTTTCCCCTCCATCTTAATGAAAACTTTTCTGATAACCCCCAATCCCCACCAAAGCCACTTCATAT ACAAAAACATTTGAAGAAAACAATGGGGTTCATTTCACACCGAAGACTGATTTTTTGTTTCAATTGAAAATACTGGAATTCAGTAACAAGAGAGTTGCGG CATTGTGTAAAACAGGTATCTGGAAATCTGGAAGAATTTATGGTAGTGGAATTGCTAACGGTAACAAGTGAATGATAATATACTAGGATCTTATCATCTG TTTAACAGGGGAGTGTGTTATAGTGTAGGTAGGATGATGAAAGGAATTTTAGGAGGAGTAGAATTACAGTTTCACAAAACATTGTGGTGATAGCTATCTT TTGGAAACTAAATAATGGCTTCTTTTGATGAATGGGCAATGGGTTGGAATCTGTTTGGATATTAGCAAGGCGTGGGACTTCTGCCCCACACTAGAATGAC TACTTTTGTGCTGTGGTTCTCCTGAGATTCGTATCAATTGGTATAAGAGCGTTCCAAAATGTCTCACAATTTCAAAGGAACTGTGTCGGCGGTGAAGCTG GCATTGTAGCGTTCACCTATGTCTAGTAAAGTGGTAGTACACAGCTTGCTCATTGGACACCGGAGCTGCAAAGCATGGTGGAAAGTTAGGATTCATTTGT AAGTTTAAACGCGGAACAGTCCCCTCAAAGTGGTGGTATACTGTCCACACTGGCCCTGCATTTTCCTCTTCTTTTTAGCTTTTGGGAGAGACATAATCAG CAACAAATTGCTACTAAGAAAGAGAATGCAGTATCTCCTCACGAAGTATCAGATTCTAATGACATCAATGAGGGAGCAACTAGGATTGCAACCGATCTCA TAGATGAAAATCCTAGTAAGGACTATGAAGAGTTAGAGCCAGCAGTGAGCAGCAGCAGCAACTCAGAGTTGCCTACTTCAAGAGGCTCTGAAAAAAGTGA AGATTCATTTGACAGCATGGCCAAGTATTCTATTCATTATGACTCCATTAATGAAGGAGTAGGTGACTCTGCTTTTCAAAGGGAGCGACTTGAAAACTGG AATCTCGGTCCTGGATATGAGGTGGCAAAGGAGTGGGCCCAAGAAAGAGCAGCTGATTCTACACCCGTGGTTGATAAAATAAGCATCTTCCACCTTCCGG TTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTATTCAAAAGATCCATTTATGAGAAAACAGCATGAGCCAGAAATTGATAATGATGCAAAAGTACCAAC CATAAATGGAGGTATGTCTTCATGGAGCACAGTGACTGATGCAGGTTTGGAAGCAGTGATGGAATTTGCATATTCACTTTTGAAGGGAAACGATGCTAAT AAACCAAAGAAGCATGGAGTTCTATCTGTTCGTGCTGCATCAATGCTGGAGGCAGAACGTGATTTGCCAAAAAAGTGGAGTCCTGTTGTGGAAATGCCGT ATAGAGGAGGAAGGTACAAGGGAAGATGCCAAGGAGGTCTACCCGAAGGAAAGGGGCGCCTTGTTCTTGGAGATGGAAGTATATATGATGGTTTATGGCG CTATGGTAAGAGATCTGGTACAGGTACATTCTATTTCAAAAATGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATGCATGGCAAGGGTTGGTTT TATTTTCACACTGGTGATCGATGGTTTGCAAACTTTTGGAAGGGAAAGGCTGATGGTGAGGGGCGGTTCTACACGAAGTCTGGTGATGCCTTCTTTGGCA GTTTCAAAGATGGATGGCGGCATAGCCAGTTTCTTTGCATCAATGCTAATGGAACAAGGTATATTGAGATGTGGGAACTTGGTGTCCTTGTAGGCACCAA GCACTTAGGTAGGTGACCAAGCACTTGGTGTCCTTGGTGCCTCAACTTGTGATTACTGTCAATCTCAACAGTCTTTTTGTGTGTTGTATATGAGGCATTA TTTGACCGTATGTTGTGTTTTATTTATTCATTTTTTAGACGCCAATTTTGCCTTTTAGTTTCTTTTCCTCTTCTTTTTTACTGCTACGTTAGAGTCGTAT GGTAAATAGATTTTCAAATAACTTTGGCCATGAAGATCTAATAATGCCTTACGCCCTTACGTACCTAACTCGTTTGTATTTGTTACTTCACATCTACATA TTCATGGCCACCGTTGTTTGTGATTGCTTTTGGATCAGTTGAGGCAAATAATCGTTTCATCAATTACCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29682; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106528
| Blastp | Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 from Arabidopsis with 54.79% of identity |
|---|---|
| Blastx | Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 from Arabidopsis with 45.5% of identity |
| Eggnog | whole genome shotgun sequence(COG4642) |
| Kegg | Link to kegg annotations (AT1G75010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452627.1) |
| Pfam | MORN repeat (PF02493.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |