| Id Trinity | FTRINITY_DN52986_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_106208 |
| Sequence | AAACACTGACACAAAAAAAAAAACCCAATTTGCCAGCGACGACTCCAACCATAACCAAACCCACAAATCTCTCACAGAAGAAGAAAGAAAGAGCAAAAAT TTCATATCAAACACTGACACAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAGAATATGGGTTTGGTTAAATTTGCTACAACCATATTCACAGTGATAAC TCTTCTGGGCTCATTAGCACCGTCTCAAATAGAAGCCACGTTCAAGTGTTCAACAACAAATGCCACGTGTCATTCACTGGTTGACTACAAGAACCCAAAG GGCACCACCCTGCGCTACATCCAAACACTCTTCAACGTTAAACACCTCCAAGACATCCTCGGCGCTAACAACTTACCCACCAACACCATAGGTAACTATA GTGTGGGTCCCAACGAAGCAATCAAGGTCCCCTTCCCGTGCAAGTGCAACAATGGCACGGGTCTATCGAACCATGTTCCGGTCTACACCATCAAAGCCGG TGATGGTTTATACGACATAGCAACCACCACTTTTGCAGGCTTGGTCACGTTCCCTCAGATCCAGGAGGTAAATAATGTAACGGATGCGAATAAGATAACA GCTGGGGATAAGTTGTGGATTCCTTTGCCATGTAGCTGTGATGAGGTGGGTGGGGAAAGTGTGGTGCATTATGGGCACATAGTGGAGTCAGGGAATAGTG TGGAAGGGATTGCTAACAAGTATGGAACTACACAACAACTACTTCTATCTCTCAATGGGATTTCTGACCCCAAGAGTCTTCAGGCTGGTCAAGTTCTTGA TGTTCCCCTCAAAGCTTGTTCCTCAAATGTGAGAAATGACTCATTGGACTTCCCTTTGCTTGTTGCAAATGCTACTTACATCTATACTGCTAATAACTGT GTCAAGTGCAAGTGTGATTCCAGCAACAACTCTATATTACAATGCGAGCCATCATCACAATTCAAACCAACCAAATGGTCCATTTGCCCCTCTACGCAAT GCTCAAGCAACTTATTCATTGGCAACATTACGTCTATGGATTCCTGCAATAGCACAGCCTGTGACTATGCTGGTTATACCTCGAAAAACATCTCTACAGT TCTTGCAAATCACTCCACTTGTGCTGCAGTAGCACCAAGTGGTTCAGAACCAGGTTCAGGAGCATCAAGCAGCAGCACCTTGCAAGTTTGGGTTTGGAGT AAACTTTTCATTCTCATTCACTTCATCCTCTTTTCTGTATATCTTTTTTAGTAAAACAATCTGAAGTCATGTTTATTCTTATTTGCTTTCCTTTTTATGG ACGATTCCACTGTGATTTTCTTAGTTAAGGTCAATTGTTTTGTGATGGAGGGTGGTCGCAACTGAACCCTTTTGTTGTTCCTTTACAACATTTGTAACTG TAACACGTTTGGAAGAATAAGAGTAATATATGATTATGAACTGCTATAATGTGTATCATTTAGCTGCGCTCGCAGAGACCCAGGCTAGCCGAGATAGGTC TATGGTCCAGGCCACAATGTTTGAACTCGTGCCACACCTACTCGACAGGTTTTCTGGCTAGAGGATGGCAATTTCGATTTCCTTAAGGCAATAACAGAAG CTTCTGTTTTTATGGTAACAGCTTATTGAGTAATAATAGTTGTCAACATATCATGCTTATAAACTCTAAATGCTTATGATTGTTGTTGTTGCAGCTCTGA ATTTAGTAACACCTTTCAGTGGATATGTTCATACATAAATTTTTGCTTTCTTATAACAAGTCTTTCTATTAAAGAATGAACCAATTCTTATGCTCTCCTA TTATATCTAGTAGAACTTTTAATTCCAAAATAATCTAAATAATTTTTATGTAAGTCAACATATGCTGCAAGTAAAATGATAAACAAACATTGACCACAAT TATAGCATCTACACCATCCTTTTCTTTCCACCAATTCACCAAACAAAACATCATTCCTACTGAGTTGTCCACTTTCTTCTCATACTTGGCTTTTCCTTGG CATTCATCGGGAACCAAGGCCGAGCAGCGTTGGTTTGGGCAATAAGATCGGTACTCGAACTTCAAAATAGTTGAAGTGCAAAGAGTATCCGTTAGGATAC AAAGTAGACCAATTTGGAAAGTATATTCTAGGAGGAAGAGAATAGGACCTACACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29733; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106208
| Blastp | LysM domain-containing GPI-anchored protein 2 from Arabidopsis with 47.81% of identity |
|---|---|
| Blastx | LysM domain-containing GPI-anchored protein 2 from Arabidopsis with 50% of identity |
| Eggnog | domain protein(ENOG410XV98) |
| Kegg | Link to kegg annotations (AT2G17120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464408.1) |
| Pfam | LysM domain (PF01476.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |