| Id Trinity | FTRINITY_DN52988_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_105556 |
| Sequence | AATAAGAACAAAATTTGCAAAGTAGTCTTTCTTTTTTGGACCTCTCTTACATTATTTCCTTCAAAACTCAAACAAAATTCAATCTTTTTGTTCTTGATTC TCTTGACATTATGGGTATATAGGATGGAACACCATGTTCGAGCACATTCATCTCCATTGTTAAGCATTTCCTCAAGTGACACTGGACAGCCACAAGATGA TTCTGGTGTGGAAGGCCTTGCCACAAACATTAAGCTATTGTTGAAACTCATTCAAGAACATAATGGGTGTAGTACAAAAGATAATGATGAGCGCAAGTGT AATAGGGTGAATGGAATGATGTTCATATTAGATGAGACTAGATCCAGGGTTCAAAAAATTCAATCCTCGACCAAGAGAAAAGCTGAGCTTCGCGGGTGTA ACACAGATGTTAGGTCTAACCTTCCAACTCGTAAAGACAAAAAGCTTCACCCCGATGTGATCGTGGATGAGAAGGAGAAGCTACGGAGAGAGCTTAATGC AAGCTTAGTGGCACGACAAAGCCTTCAAGCAATGTGTTCAAGTTTGGGAAAAGAAAAACAGATTATGGCTTCAGAGCTTGCAAGAAAGGCTCAAGAATTG GCAGAATTGGAGGAGTACACCAATGATTTGAAAGCGCGGAACGACATGTTGTTGGAGAGGTTGCATGCTACAAGCTCAGAACTCAAGGAAAAGAAGAATA ACGGAGTTGATATGGAAGGCAACATAGCCTTGCAAGAGCGTAGCAAGGCGCTACGAGAGCAACTACAAAAGTCCATCGATTGTTATAAATCTTCGAAGAG AAAACTCAGAAACATACAAGAGGAAAACAAGGAAATGCATGCTACAATGGATCAAATGGATGTGGAAGTTCAAGCAGGCATTGACAGGATACATGGTTTC AAGAAAGAAATTGTACCAGCCAATGAACAAATCCAAGATGAGATTTCAGCTTTAGAACATTTATTTGAATCTCTTAGCATGAAAATCTCAAAACATTCAC AGAAGAAAACATAATATGATGAGGCAAAAGCTCAATCTGTAATTGCTAAAGGCGAAGACAAAAAGAATGAATTACAGGAGAAGATGATGGACATTGTATC AACACAGCATCCATGTACAGCAAGCTCTTATTCAATTCATGCACAATATGAAAGCTTACATGGTACATAATACATGTTCATGCAACTATATATTAAACTG CTTGTTCTCAACCTCAAAGCAGCCCCAAAAGCCACACTTTCTGTAGATCTTAGCACAGTAATCCATACTTGTGCACACCCTCGCCAACTTAGCCATGTTA GGAGGAAGAGGCTTGAATTTGTTTACTATGCACACTGCAGAATGATTGCAACGTATTCGGTTGTGTCTCTCTTTGAAGAATCACATCCTACCTCAAAATC AATACAGTATTTTAGATGCCATTACCAAATCCTGATAAATATATATATTACCATTTACCAGTAATCTTTACAGGAACATGAACCACTTCTAAAATGGTGG AACCGACTACGGTCCCTGATAACGATCTCTCTATCATAAACCTTTGATATCAGTTTGATAGCCATATGACAATCTGCACAAACTCTTAAATTCTTCATAA CCCTGATTGGGGTCCCTGGTGCTGTATTCAAGAGCATAAAAGCAATTGCAACCTTTTCACTGTGATAAGACAAAGCTTGTTCCTTCTCCTCTTCCTCTAT GTCTGCAAGCACATTTGCAGTATGAGGCACATAACCTTCTAACTTCAATAATTCTGTGATCTTCTCCAGTAGTGCATATACATCCTGACTTTGAGGATGA GATCTATCACCTATAGTAAATTCATAAACACGGTTGCCTAACTCGACAAAACTATAGCCAGGGGTTTTCTTAACACCATCATTCAGCATTGACCTCCTCA CTGATTGTACATCTGACCAACGCTGTTCAGAGGCATAGAGATTTGAGAGAAGCACATAATCCCCACTATGTTTAGGCTCCAACTTTAAAAGGTGGGATCT TGCTATCTCTCCCAAACTCAAATGTCCATGTATTGTACAAGCCCCCAACAAGGTCCTCCAAATAACTGCATTTGGCTGCAATGACATGTCCTGAATATAT TTGTATGCTTGTTTCACCAAACCTGCCCTACCCAATAAATCCACCATGCAACCATAATGTTCTATCCTCGGCATGATACCATATTCCTCTTTCATCCTTC TAAAGTAATTGAACCCTTCATCCAACATCCCGCAATGGCTACAAGCATACAGGACACCAACAAAAGTGATCTCACTAGGCAGTATCTTTTGCCTTTCCAT CTCTTTGAAAAACTTCAGTGCTTCCTCGCCAAAGCCATTAATAGCCAAGCCAACAATCAAAGACGTCCAAGAAATCGTGTTCCTTTCTCCCATCTCACTG AATACTTGTTGTGCCTCTCTAATGCTCCCACACTTCGCATAAAAGTCCAACAAAGAATTATTAACATGTAAGTTCTCTCTCAGACCTACTTTGAACGCAT ACACATGAACCCTGCACCCTAACTCTAGAGCTCCAAGTTCAGCACAAGCAGATAACAAGCTAACAATGGTGAACCCATCAGGCTCCACACCCTCCACACT CATTTTCCTAAACAAAGTCAAAGCCTCATTTGGCCTGCCATTAAGAGCAAACCCATTAATGACAGAGTTCCAAGCGACGAGATCTCTTTCTTTCATTGAC TCAAACATCTGGTGTGCACTTTCTGTATGACCAAAAGTAGCATACATATGAAGCAAACTATTCTGAACAAACAGCAAAGACTCAAACCCATTTCTTATAG TAACTGAATGTATAGTTTCCCCTTCTCTAACATTCAACGACTTAGCAACAGCCTTGAGAAGAAAAGGGTAAGTGTGGGTGTCAGGTTCAACACCAGACAC TACCATTTCGCGGTACAAATGAAATGCAGGAACGGGGTTTTCGGTTTCAGCATAGCCCCTAATCATGGTGTTCCAGGTGAACACATTTGGGTTATGCATT ATGGCAAACACATGGTATGCATAAGACATAGGTGCAGAAAGGGATACAATAGTATATATAAGATGTTTACCCATGTCAGGGTTATTCAATGGGACACCAT GCCTAATAGAAAATGCATGAATTTGCCTAAGTTTGTATTTGGAAGATGCACACATTTGCAAAAGAGCAATGCATTTAGTGATAATATATGACATTGGGTT ATCTGTGATAGTTGATAAAAATGAAAAGGAACATAAATGAATTTGGGGTTTGATTTTGAATGGTAATAAGGATTTGTGGATCAATGAAGAAAAGTTTGAA AGCATATTCATTTGGCTCAATAATAAATCCAATCACCACTACTGGTAAATGCAGCAATTTTCATAAAAAAAATTCACTTTGTGATGTAGTCATAAAATAT ATATACAACAACAATCAAGCTTTAGTCGCGTGGATAGGCTATAACAATTAATTTATTAATTTACGAGGGTAATATCTATATATTGACAGTATACAGATTT ATACACAGTCAATACATTATCCATATGTGCATCATTCATATTGGATTGATATACAATAACAATCAAGTTTTAGTCGCGCCGGATCCGTTATAACTAATAA TGTATATAAATTGGATATTTCCAGTGTCAGTGTGACATGTTTACTCTTGCTATTGCCTCTTGCCTTTGTCAGTGCTTCATTCTTGTTTGTTGTTTTTTTA CTTATAATTTCTTCAACCATTTTGCAGTGGGGTGCTGCTTATTGTGTTCGAGGAGGCCCTGAAAAGGAAAAATTGGCCATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29753; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_105556
| Blastp | Pentatricopeptide repeat-containing protein At4g21065 from Arabidopsis with 66.67% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At4g21065 from Arabidopsis with 66.67% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT4G21065) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430900.1) |
| Pfam | PPR repeat family (PF13041.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |