| Id Trinity | FTRINITY_DN52990_c3_g4_i5 |
|---|---|
| Name Transcript | Ll_transcript_104857 |
| Sequence | GTGCATACATGCTTTTTCTCACAGTCAATCCAACATGGTTTTTTGATTTGCATTTTACATCTTCCTTGTTTTTCAGACAACACCAACCTCAACTACATTC CCAATCTTACAACCTTCAACCTTAGTTGTAACAACACAACAAAAATCTCATTCTCAGAAAGAAAAAAGTGAGAGAGTGTTGCCACGTCACCATCTCAGCT TCACCATTAAAAAGTTTCCATTTTTTAATTTTTCATCATATTTAAATACACCCCATTTGCGTGAACACTTTGTTTGATTTGTGTTTTTGTTTTGTTTCTT TCTAAACAAAACGTTGTTGGTTTTTCTCTTTCAAGATTTTTGCTCTGTTGACTCAAAGAGAGTGTTGTTTGTAATGGGGAATTCATTTGGGTGTTCAGCC TCCGGCGAGAGGCTGGTATCGGCGGCGAGGGACGGCGATTTGGTTGAAGCTAAGGTGCTTTTAGAATGGAACCCTGGTCTTGCTAAATATTCAACCTTTG GTGGCCTCAATTCTCCTCTTCATTTTGCAGCTTCTAAGGGCCATAACGAGATTGTCACATTGTTGCTTGAGAATGGAGCTGATGTGAACTTAAGAAATTA TTGTGGGCAGACACCGTTGATGCAAGCATGTAGATATGGTCATTGGGAAGTTGTACAAACCCTTCTGCTCTTCAAATGCAATGTTGTGAGAGCAGATTAT CTCAGCAATAGAACAGCCCTTCACTTTGCAGCTGTGAATGGGCATGTTAGATGCCTTAGACTAGTTGTCGCCGACTTTGTTCCAAGTGCTCCTTATGAAG CTTTATATGCTCGCTCAGATGCTGACACGACTGATGGATCAGATGTGAAAAGCAAAGGTGAACAAAGTGAATTGTCTAAGTTTGTAAACAAGGTAGCTGA GGGTGGTATTACTGCCCTTCATATGGCTGCATTAAATGGGCATTTTGATTGCGTACAACTGCTACTTGATCTTAATGCAAATGTGTCAACTACAACAATT CATCATGGAACATCGATTGATATAATAGGCCCCGGGAGCACTCCGTTGCATTACGCTGCCTGTGGGGGCAGCCTAAAATGCTGTCAGATTCTCCTTGCAA GAGGTGCCAGTCGGATGATTGTGAATTGCAATGAATGGCTTCCACTTGATATTGCTAGGATGTGGGGGCGTTATTGGCTTGAACCATTGCTGGCACCCAT TTCCGATGCCGCAATACCGTCATTTCCGTCTTCAAAGTATCTGTCCTTGCCTCTCATGAGTGTTCTCAACATAGCCAGAGAGTTTCGATTGCAATCATCT ACAACTTCTTCGAATGGAATTGAGTTTTGTGCTGTCTGTCTCGAGACGCCTTGTTCAGTGGCTGCAGAAGGATGTGGGCATGAGCTTTGTGTAAGCTGTG CTCTCCATCTTTGTTCAACAAGCAATGGTTCTCGTGACATCGTTAGCCCTCCTGGTTCTATCCCTTGCCCCCTTTGTAGGCACGGGATTGTGTCGTTTGT CAAGTTACCAGGTTCTCAAGCAAAAGAAAATAAACAGAATGTGTCTCTCCGCCTGTGTACACCATGCATGCTACATCCACGTGATGTACATCGACCAGCC CTTTCTCATGCATCAGAGATTAGGAGAAATCGTGTAGCTTCTGTTTCTTCAGAGACGATCTGTTCCATCACTTGTACTCCATTTCCATCTATGGCAATTC CTCTATGTACTTGCAACGGTGGTTCTTGTCCATCATTTCAATCCCGTGAAGTAGAAACTGGAGATGAACCTTCTCATAGCTCACAAGCGTCAGCATTGGA TCAGAATAAAACGGAGGGGCCAAGAGTAGAAAAAACATCATGTACAAACATGTTTCGGGCTAGAAGAAGTTGCAGCAGAGAGCATCGTTGCGATTCAGAA ATAAATACTGGAACTCAGTAGTAAACCAGGTTTGGCCAAGCTAGCATCGCCCAGCATGACCGAGGTCCATGACCATGACCGAGCTCAGTGCGCCATGGCC GAGGCCTATGACCGAGACACCATCACCCATCTGACCGAGGCCCATGACTGAGACAGCTTCGCCCATCTGACTGAGCCAATCCATCGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29776; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104857
| Blastp | E3 ubiquitin-protein ligase XBAT33 from Arabidopsis with 66.47% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase XBAT33 from Arabidopsis with 66.47% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (AT5G07270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464952.1) |
| Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |