Id Trinity | FTRINITY_DN52994_c3_g2_i9 |
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Name Transcript | Ll_transcript_106064 |
Sequence | GGATTAATCAAATTAAAAATTTATAATTTCTAAGGTGAACATCATATATTTAATATAATTATGTCTGCTATTTATTGTTTGGGTTATTAAACAAGTGATC TAATTTCTGACAACATATAAGACTTCTAAAAGTGGTAATAAATATGAGCTTAATGAGTGGATACCCAAACAGTTAACTCATAGGGGTAATGAGAACCTTA TACGTTAACATATCAGGAATGATTATGGTCCCCAATATACCAAATCACACATAGTTTTCATCTATCCCCATCAGATATAAGACGAAGGTCCCATAAGGAA TCAAGGATTTGGTTGAGGAAGACTATCATACCAAAACGCTTTATGAAAACACACAAAAGGAACAGAGCCGAGAACATGAATTCAGGTATGCTATTGAAAT CCTATTTTATCATATTTGTGAGAATCATGAGATTCAAGATTGGTGTTACACCGATCATAAGGAATATCTAACGCGTGTATGATTTAATATTAATTAGTTT ATTCCGAATTATTGATAAGGATAAGATTATATTCATACATTTGTATAGGAACACGAAGCTGTTATGGTGTTTATGGTCCTATCCATGATGGGCTTGTGCG GACCATGCATGTAACTTGTCTTGTGGGTTAACAAGTTGGAATATTGTGGACATATGGTGTTATTCATTTACTTGAATTCCTTTACTAGGTCTCTTTTGGA TAAACAGAGAGGAGAGGTTTTATCCCTTAGGTCCCATATTTTTTTTAAATAACATTTAAAATGATGTGAGGGGAGCAAAAACAAAATGAAAGCATTTAAA GGGAAATTATCCTACAAAATTTGAGCTTAGGTTTACATTAAACAGTAAATATATAATCTTTTAGAAACATAATAATGATACAAGAATCTGATGTCCCGAA CTCTGTCCCAAAACATGTACCAAGTCAATAAAAATATGTCACATCAGTTAAAAAAATTAAATATTCATATTTTCTTTTATTTTTCCTTTACTCTAATTGG CTTGGTACATGGTTGGGGATATACTTTGGACAGCTGATCCCCATATGCTAATTACACAATGATAATTGGTCCAAAATATTTACAATTGTTTTGTTGATAA CTTTATTGTGCATGTGCATGTGAGTTGATAATTTAGAAGGAGATTTTGGAACCGGCCATTAAAGGGACAGTTAATGTGCTGAAAGCAGCAAAGGAAGCAG GGGTGGAACGTGTGGTGGCAACATCATCAATCTCATCCATAATGCCAAGTCCTAATTGGCCAGCTGATAAGATTAAGGGTGAGGACTGTTGGACCGATCT TGAATACTGTAGGGAGAAAGGGTTATATTATCCCATTGCAAAGACTCTTGCGGAGAAAGCAGGTTGGGATTTTGCCAAGGAGACAGGTTTTGATGTAGTG ATGATAAATCCTGGCACAGCCTTAGGCCCTCTGATTCCACCAAGAATAAATTCCAGCATGGCTGTGCTTGTTAAGGTTCTCAAAGGCGACAAAGAGACGT ACGAAGATTTCTTTATGGGAACAGCCCACTTTAAAGACATAGCCTTGGCACATATTTTAGCCTATGAGAAAAAGAACGCTGCTGGAAGACACTTGTGTGT TGAAGCAATTCGTCACTATGGTGATTTAGTGGCCAAGGTTGCTGAGTTATACCCTGAATATAATGTGGCTACGTTGCCAAAGGATACACAACCTGGGTTG TTGAGAGCAAATGATGCATCAAAGAAGTTGATTGATTTAGGTCTTGTGTTCACTCCAATCGATCAAATTATCAAGGATGCAGTGGAGAGTTTGAAGAGCT TGGGCTATGTCTAAATTTCTCAAATGGGACTGACTGCAATGTCACAAATTGTAATGGTATTAATAATCTACCACCATTACTTTAACTCGTTTATCATGTC GTTTCTGTTTTTATTTTTCAAATTCCAGTTGTGTGTGTGGCTATGGTTTAAAATAAGGATGAACTTGCAGTCTAGTCATTGTGAGTTTGTAACTATCAAT ATCAGACAAGAGTCCATGTGTATGAACTCTTGTGCTAATAAATCTTGAAAGCCTTAAAGTCTTCTATTGTTTAAGCTTTGCTATTACTATTCAATTACAT ATTAAGAGGATATCATâBLAST |
Tissue | flowers |
Gene name | LI_gene_29817; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106064
Blastp | Cinnamoyl-CoA reductase 1 from Arabidopsis with 38.83% of identity |
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Blastx | Cinnamoyl-CoA reductase 1 from Arabidopsis with 39.82% of identity |
Eggnog | Nad-dependent epimerase dehydratase(COG0451) |
Kegg | Link to kegg annotations (AT1G15950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439258.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |