| Id Trinity | FTRINITY_DN52996_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_106686 |
| Sequence | CAAACACAATATAAAAGCCCAAAATAGAACATCAATGACAAATTCGTAATTAAGAGAAATCACAATGGCAAATGCTGAACCAAAGAGAGAACTATATAAA CTGAACGACTAATTAGGGTTTCGCAATTCACAGTGATGGCAGGATCATTCGATATCGGAGCCGTTCCTTTCAACGCCGATGGCTGGGGCCCACCGGACGC CGCCGTCGACGGTTCCAACACCACCAACCTCCCTCACAATGTCCCCTTTGCTCCCTTCTCCCGCTCCGACAAGCTAGGCCGTATCGCCGATTGGACCCGA AACTTCAACAACCCCGCCCGATCCAAAAACCCATCCGACGCCGTTTTCGACTTCACCAACGACGATTCCTTCCCTGCTTCCGCCGACGACGACGCCACAT TCCGCCTCGTTGACGGGAAACCACCACCGCGCCCCAAATTCGGTCCTAAATGGCGTTTTCAGCAACAAAGACAACTCCCTCAGCGCAAGGACGAAGAAGT CGAAGCCAAAAAGCGCGAAGCTGAGAAAGAAAGAGCTCGTCGCGATCGTCTCTACCATCTCAATCGCTCAAACCCTCACGGTCCACGCCGTGAAGCTGCG GTTTTCAAATCCTCAGTCGATATTCAACCGGAATGGAATATGCGCGATCAGATTCCTTTCTCGACGTTCACTAAGCTCTCTTTCACTGTTCCCGAACCCG AAGACCTTCAATTCTGTGGTAGCCTCGAGTATTATGACAGAACCTACGATCGCACTACGCCGAAAAGCGATCGCAGATTGGAGCGTTTCAAGAACAGAAA CTTCTTCAAGGTTACCACTACCGATGATCCTGTTATTCGGAGGCTCGCCAATGAGGATAAGGCGACTGTTTTCGCTACGGATAGTATCCTGTCCACGCTT ATGTGCGCGCCAAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTTGGGAATAAGTTGTTTTTTGACAAGCGCGATGGTTCACAATTGGATTTGC TTTCGGTTCATGAAACATCTCAGGAGCCTCTGCCTGAGGCCAAGGATGATATTAACTCTGCACATTCGTTGAGTGTTGAGGCTGCTTATATAAACCAGAA TTTCTCGCAGCAGGTTTTGGTTAGGGATGGGAACAAGGTGAATTTTGATGAGGCTAACCCTTTTGCTAGTGAGGGTGAAGAGGTTGCTTCTGTGGCTTAT AGGTATAGGAGGTGGAAGTTGGATAATGAGATGTATCTTGTTGCTAGGTGTGAGGTGCAGAGTGTGCTTGATGTGAATAACCAGAGGTCTTACCTTACTT TAAATGCTTTGAATGAGTTTGACCCGAAGTATTCGGGCGTGGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCTGTGTTAGCTACTGAGCTGAAGAA CAATGCGAATAAGTTGGCTAAATGGACTGCTCAGGCTCTGTTGGCGAGTGCTGATTTTATGAAGTTGGGATATGTTTCTCGAATTCATCCACGTGACCAT TTTAATCATGTGGTTTTGTCTGTGGTTGGATATAAGCCAAAGGACTTCGCGGCACAGATTAATTTGAACCCAAATAACATGTGGGGAATCGTGAAGTCAA TTGTGGACTTGTGCATGAAACTGGAAGAAGGGAAATATGTTCTTGTGAAGGATCCGTCTAAACCACAGGTTAGGATTTATCAGGTTCCTGCAGATGCATT TGAGAATGACTATGTGGAGGAGCCACTTCCGGAAGAGGAACAAGCTCAACCTCCAGCAGAGGGTGCTGATGGTGAAGAGGCAGCTACTATCTCAAATGAT GTGACTGATAAGCAGATAGATAACAAAGCTTGAGAGGTAATTTTACTAACTCAGGTTATTCACTATTTAATTTTATTAATGCTCTAAAATCTACATATTT GTATGCCTTTCGAGTAATTGAAATGTTTTGCATAATGCTCTGTGACTTGTTATCAGTTATTAATTTAGCATGTTGCATTACATTTGTAGGATCACAGGCA TACATTAATGGTCCTTTATGATTGTTCAGTGCGGAGGTCTTGTTACATTTAGGATCATAGGCATACATTAGGTCTCTCTCTTTCTTACTTTGCTGTAGAA AATATACTCTTAATTTCCTCTTAAAAGCATGGTTGATAAGAGTGAGGACTGGATCCTATGCTTTGAATTAGAGTTCCTGGTCTCCACTATAGTGGATATG GGATTTGCACTCAAAGTGACGTGCCCACTGTATGTCTTTAATGCCACTTGAGTTGAAGGTCTTTTGGAGAATTTATTTTGCCTTCCTCTGAATCAATTTT CAGTGTCTTCTGTGCAGTTATTTAACTACATCTTTTGTTTTTCTCTTTTTATCTTCTCCGGTTGTGGCTACAAGATTATTGTGGTGGTTGTTTTTTACTG TCTTTGGACCATGACCATTGACATCTATTTAAGACTTTCACCAATCAAAGTTCTTGGTTCTATTATTGTCAATAATTTAACGGACAAGCAAAATATTTTA TTAACATATTATGGATAACTTAGCACCTGGATAATGTTGCTGAATCTTAAATGTTCCGTTGCCTTTTCTATTCCTTTTAGCACAAAAATAGTTTGCTCTT CTGTTGCTTACCCCGACAAAAAAGGTACCCCTTGTTGAGAATCAATCACGTATATGGTTCAAATCCTAAACTGTAGGTATAAGAAGACAACAAGCCACAT AGTTATCTAACTTCTCATACTATTTATTTTGGTAGTGGTTATGGTTTTGCTGTTTGGTGAGGGTGAACCTCAAGTGATCAGTCTTGTTATGTGTTGCTAT GCTATATGTTGAATGTGTTGATGAATGCTGGAGAGACCTGTAATTCAAAATAAATAGCATTTCAATTGGGTCTGTATGGATATGTTTGAGGTCGATAGTT TGAACGTGAACACATCATGCCATTTGAAAGTCGTGCAACTTGCATAACTTGAGGTCTTTCATTTGAGAGCTTTAGAAAATGCTCACATATCATGTCATAT GTTGGTGGGCAAGAAATGTGCATCAATGTGATCACTGCTACTATTGAAATTTACCTCCGTCGATGACCAACATCGGTTGTGGGAAACTTTACAAGTGCAG TTTTCTGTCAATGTGCACTATGTTCACTATTTTCATTTTAATGTCGTTGAATATGTAGGAATCCTACATTTATCTGCAGCGACGGGTGAGGTTTTATTGC TTCTGTTTGATCTTTTTTTTTGTAGTGGCAAGAATTTTATACAAATCCCATTAAGCATTTATTGGGGATGGATTCATCACTTCTAGCTTCTACTATGTTA TTGTACCTAATGGAGTTAAGGCTATTAAATAATTATAGAAATGTGGCCAATACCTACATTATAGGTTGGATTTTGTGTGCAAGTCATAATTTAGACCTTA TATTTTTCTACTAGTAGATAATACAATATTTTTTGGGTTGGATGCAGGTCACATTTATATAGGGTCTTAATGTTAATGGCTGTTCAACTGCGAGCTGCAC TCAGAATTATTTTCTCCCCTCGTGTGCTCACTTATCCTGCTGAAGTTTTGCAATTCATGTTCCTTTGAACCAAAACGTTTGAAGTCCAAACTTAGAGTTT TTTTATATTACCGATGTTTATGATTTATATTGACCTGAACATATTTAAGTGGAATCAGAACGTTCATTAGAATGTACCATGCTTTTTTTTTGCAAGTTGA TCATATTGTTATAATAAGTGCTGAAAAATACTAATTTCTTCAAGATTCAAACTCACTCCTCCAAACTTTTTAAATATTCTTAAGTAAATAAATTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29835; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_106686
| Blastp | Eukaryotic translation initiation factor 3 subunit D from Arabidopsis with 76.55% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 3 subunit D from Arabidopsis with 77.13% of identity |
| Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(ENOG410XP1E) |
| Kegg | Link to kegg annotations (AT4G20980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425261.1) |
| Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (PF05091.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |