Ll_transcript_106688

• Id Trinity: FTRINITY_DN52996_c0_g1_i7
• Name Transcript: Ll_transcript_106688
• Sequence: CAAACACAATATAAAAGCCCAAAATAGAACATCAATGACAAATTCGTAATTAAGAGAAATCACAATGGCAAATGCTGAACCAAAGAGAGAACTATATAAA CTGAACGACTAATTAGGGTTTCGCAATTCACAGTGATGGCAGGATCATTCGATATCGGAGCCGTTCCTTTCAACGCCGATGGCTGGGGCCCACCGGACGC CGCCGTCGACGGTTCCAACACCACCAACCTCCCTCACAATGTCCCCTTTGCTCCCTTCTCCCGCTCCGACAAGCTAGGCCGTATCGCCGATTGGACCCGA AACTTCAACAACCCCGCCCGATCCAAAAACCCATCCGACGCCGTTTTCGACTTCACCAACGACGATTCCTTCCCTGCTTCCGCCGACGACGACGCCACAT TCCGCCTCGTTGACGGGAAACCACCACCGCGCCCCAAATTCGGTCCTAAATGGCGTTTTCAGCAACAAAGACAACTCCCTCAGCGCAAGGACGAAGAAGT CGAAGCCAAAAAGCGCGAAGCTGAGAAAGAAAGAGCTCGTCGCGATCGTCTCTACCATCTCAATCGCTCAAACCCTCACGGTCCACGCCGTGAAGCTGCG GTTTTCAAATCCTCAGTCGATATTCAACCGGAATGGAATATGCGCGATCAGATTCCTTTCTCGACGTTCACTAAGCTCTCTTTCACTGTTCCCGAACCCG AAGACCTTCAATTCTGTGGTAGCCTCGAGTATTATGACAGAACCTACGATCGCACTACGCCGAAAAGCGATCGCAGATTGGAGCGTTTCAAGAACAGAAA CTTCTTCAAGGTTACCACTACCGATGATCCTGTTATTCGGAGGCTCGCCAATGAGGATAAGGCGACTGTTTTCGCTACGGATAGTATCCTGTCCACGCTT ATGTGCGCGCCAAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTTGGGAATAAGTTGTTTTTTGACAAGCGCGATGGTTCACAATTGGATTTGC TTTCGGTTCATGAAACATCTCAGGAGCCTCTGCCTGAGGCCAAGGATGATATTAACTCTGCACATTCGTTGAGTGTTGAGGCTGCTTATATAAACCAGAA TTTCTCGCAGCAGGTTTTGGTTAGGGATGGGAACAAGGTGAATTTTGATGAGGCTAACCCTTTTGCTAGTGAGGGTGAAGAGGTTGCTTCTGTGGCTTAT AGGTATAGGAGGTGGAAGTTGGATAATGAGATGTATCTTGTTGCTAGGTGTGAGGTGCAGAGTGTGCTTGATGTGAATAACCAGAGGTCTTACCTTACTT TGAATGCTTTGAATGAGTTTGATCCAAAGTATTCCGGTTTGGATTGGAGGCAAAAGTTGGAGACTCAAAGGGGTGCTGTGTTGGCTACTGAGCTGAAGAA CAATGCGAATAAGTTGGCTAAATGGACTGCTCAGGCACTGTTGGCTAGCGCTGATATGATGAAGTTGGGATATGTGTCTCGGATTCATCCTCGTGATCAT TTTAATCATGTGATTTTGGCTGTTGTTGGATATAAGCCGAAGGACTTTGCAGCACAGATTAATTTGAACCCAAATAATATGTGGGGAATTGTGAAGTCGA TTGTGGACATGTGCATGAAGCTTGAAGAGGGGAAATATGTTTTTGTGAAGGATCCATCTAAGCCACAGGTTAGGATTTATCAGGTTCCAACAGATGCATT TGAGAATGACTATGTGGAGGAGCCACTTCCGGAAGAGGAACAAGCTCAACCTCCAGCAGAGGGTGTTGACGGTGAAGAGGCAACTGCTACCACGGATGAT GTGAATGATATCAAGATAGATAACCAAGCTTGAGAGGTAATCTAGCTCAGGTTTTTTCTCTATTTGGTTATATATTTTTTATTAAGGTTCTAGATATTTT GATATACACTCACAATTAGTCTCTTTCCATGTGTCTGCTGAAGTTTTTGCAATTTAGGCTCATGATGTTCCTTTGGACCATAAAGTTTGAAATTCCCAAC TTGAGTTTTTAGATGCTACAGTGGTTTATTATTTAGTCACCTGAGCATGTTTGGAATAAGTACGTTTGTGTGGATGTACCATGCTTTTATGTTGTCCAAA TTGATCACCAAATCGATTGTGATAATAAGAGTTATTAAGCAAATTTGCACGAATTTTTAACAGTAAAGTATGACAGTTTAATTCTTCACTATTTTTGTGA AGAACCTTTATTTTCCTTCACTATATAAAGAGAATGGGAAAGAAATATAGTGAGGATAAACTTTTCCTAGTGAAATACACTAGCTTTCAAGTTAAATTAT ATCCAAATAGTTTTTAAGACTTCATATTTTAGATCTAAAACATGGTTAGAGTATAGAGTTACATGTGATGGATATTTAACCCATAGTCTCTTGATCATTT CCTTGGATGCTTCCACCTTTTATGTAT
• Tissue: flowers
• Gene name: LI_gene_29835;
• Additional information: details;

Expression of Ll_transcript_106688

FPKM

• FPAB: 7.2
• FPNAB: 18.5
• LF1: 12.2
• LF2: 8.6
• LF3: 8
• LF4: 15.3
• UF1: 11.6
• UF2: 8.5
• UF3: 9.3
• UF4: 12.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_106688

• Blastp: Eukaryotic translation initiation factor 3 subunit D from Arabidopsis with 76.2% of identity
• Blastx: Eukaryotic translation initiation factor 3 subunit D from Arabidopsis with 75% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(ENOG410XP1E)
• Kegg: Link to kegg annotations (AT4G20980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440242.1)
• Pfam: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (PF05091.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;