| Id Trinity | FTRINITY_DN53006_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_242600 |
| Sequence | CAGTAACTTGAAGTTGAACCAATAGTAGTTGAAGAACATCGATGCACTGAACCCTAACGAAAAATGCCTCCAAGGAAAAAATCCAACGCTTCTTCTTCCT CTTCCTCTTCCAAGAAACCTTCCAAATTCGGCATTCAACACTTCTTCGATCGCCACACCGCTTCTCAGCAGAAGATTCAGCATTCCAATGATGCAAACCC CAACACTGCTTCCGATTCCAAATCAGCCACTCATTTTACGGTTTTACCCTCGCCGAATCTTCCAGAACCTTCTGGATCGTCGAAACCAGGATGTGTTGCT CTCAGAACGGATGCGCTGGATGTTTCGCATAGCAGTGGTGGTAGTAGCAGTAACAATGATGTTAATCGGACGGCTGAGGTTACTCCGCCGGAGAATTTGG TGTTGCCGGGGATTGGTAATGTGGCGACTGAGAGTTTCGCGGCCGAGGAGTCTCCGGAGATGTCTAAGTCTGTGTCACTTAAACGCTTCAAATTCTCACC TGGGATGTTTATAAAGCAAAGTCAGGATGACGGGGCTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGACTCCAAGCAGTTTCGAAACAGATG CCTGCGATAATTAAAGCACTGTCTGACACTTCGAGAATCAACTTGCTGCCACTCCGTAGCTGCTCAGAAAATAAGGATTCTCTTGATAAAGATGGAAAGG TTGAAAAGTTGTTTACTTCACCTCCTCCCAAGGCTTCTTCAAAAGCTCTGGTGTCAATGAGTAAATTAGGGTTGAAAAGGATAAACCCAGATCGTGACGT GGATTCTAATATCAGTGCAGGTGCTGTGAGTAACTCTGGAGCATCTAGAGGAGAGAGCCCCTTCAGAACTCCACCATCTTTGTCTTATTGCTCTGATAAG CTTGGCAAGGATATTGAGCACAGTGGACCACCTCATCACTCTTATTTGAGACACAAAAAGGAATTTCTTGAGCTGTTAGATCAAGTTGAAGATGCTATTG CTGTTGACGATGCTAATGTCTGTAATCAAAGCATTTCCTGTTTTAAATCTCAAGGTGGAGTTTCTGATGAGCTTCCTGTCATAGGCAACCGTAAAGTAGA AAAGGCAAAATCACAAATACCTAAAGAGGCCGTTGGTGTGTTCTCCAATTATATTTTTTTGGTTTTAGAGGTGACTGAAAAATGTAGGATTTCTGATTCA TCTGCTGCTGGATGCCAATACAAGGTGCTCCGTTTACTAAATGAACTAACTGGGGAAGAGCGGGCTGTAAACTTGTGGGATGAGTGGTCTTGCAGCGTAG TTGCGCCGGGAGACACTGTGAATGTAATCGGTCAATTTGAAGGGGGAAATTGCAATATTGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCT GATGTCTGGAACACGGGTTGCTTCCAGTTTCAGTTGTGCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATCAAACGAGTACTCAATTGCAGCTCTAACT GGAACCTTGCTTCACCAAATTTTCCAGGCTGGGCTTATAAAAGTGTCTCCCACGGTCAACTTCTTGGAAGAATATGCAGAAGTGGTATTACAAAGAAACG TTGAAAGTTTGTATGCATGCCAAGAAAATGAAGATAATGTTCGCAAAACCTTGATTAATTCTATCCCGAAATTATTAAGTTGGATCGGACAGTTCAAGAA TACAGAGGAACGAAAAAACCCCAATGTTAATTTCAGATTTGATAATTGCCCAAAGAATGTTATCATATCTGAGGTAATTGATATTGAAGAGATGGCATGG GCTCCTAAATATGGTTTGAAGGGGATGATTGATTCTTCTCTTAGAGTGAAAGTTCAATCAGCAAAAGATGAAGGAGAGAAGATCATGCCATTAGAGTTCA AAACTGGAAAGTCATCAAATAGCCAGTCATTAGTAGAACACCGTGCTCAAGTAATATTGTACACTCTCCTGATGTCTGAAAGGTACCAGAAGACTATTGA TTCTGGTCTTCTGTACTATCTGCAATCAGATCAGACACAGGGTATTGTTGCTGAAAGATCTGACTTAGTGGGATTAATAATGCGACGTAATGAGCTAGCC AGTGATATTCTTAAGGCATTGACCTTGCAACAACTGCCACCAATGTTACAGAGTCCTAGCCTTTGCAGAAGTTGTCGCCATCTTGATGTTTGTAGCATTT ATCATAAGGCACATGGTGGAAGCACAGAGGGCAGTGGGCTGGGAAATGTGTTTGATTCTCATACTAATCACCTGACATCTGCTCATTCTAAGTTCCTCTG CCATTGGGATCGACTGATTGACTTAGAAGCTAAAGGGACTGAGCTTTTAAAGAAACAAGTATGGCGATCACATGGCTTGAAGAATCCAATCAATGGTGGC CTTTCCTCTATTGTTCTTGATTCTTCACATGGAATTCCTCTAGATAAATCTCCAAAAGACAATTATTTCATCTATTGTTTTGTACGACAAGATACTTCAC GTCTCTCTGAAGTATCAGATGGTGATCCTTCTAGTGCTTCTCCAAATGATTTAGATCTCACACTTCGAAGTGGAGACCACGTGATACTGAGCAATGGATC TAGCTCTCAAACTATTGCAAGGGGGGTGATCTCAGATATTAGTCCGTCGCATGTATCTGTTTCCTTTTCTAAATGCTTAAGAATTCCTGGGAGGTCTTCC ACTACACATGATCTCCTTGAACAGGTTTGGAGACTTGATAAGGATGAATATGTCACATCATTTGCAATTATGAGGTTTAATCTTGTACAAATGTTTTTGC AAAATGATCAAAGTGGTCATCTGCGGAGAATGATTGTTGACCTAGAGGCTCCTAGGTTTGACAGTGGATCTATAGTAAGCCAGGATCCAGCGATATCCTA TGTTTGGTCAGAGAAGAGTTTGAATGATGATCAACGTAGAGCAGTTCTTAAGGGATGCCTGGAACGGGGAAGACATCCACAATGGTTCATGCTGTGAAAT CCTTGTTGATTAGGGGCACATCCATTTTGCTGACGGCCTATACAAACTCTGCTGTTGATAATTTACTCATCAAATTAAAAGCACAGGGAATTGATTTTGT ACGTATTGGAAGAGATGAAGCAGTGCATGAGGACGTCAGAGAACACTGCCTTTCAGCAACTCATGTAAAAAGTGTTGAAGATATCAAAATAAGGTTAGAA CAGGTCAAAGTTGTTGCAGTTACTTGTCTGGGCATTTCCAGTCCTTTACTTGCTAACACAAGGTTTGATGTATGTATTATGGATGAAGCTGGGCAGACCA CTCTACCGGTATCCTTGGGCCCTCTAACTTTTGCTTCGGTGTTTGTACTTGTTGGGGATCATTATCAACTACCTCCACTTGTCCAGAGTACAGAGGCACG AGAGAATGGCATGGGGGTAAGTTTGTTTCGTAGACTCTCAGAGGCACATCCACAAGCAATTTCAGCATTACAGAGTCAGTACCGGATGTGTCAGAGCATT ATGGACCTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCGTCCGAGATAGCTAACAGAAAACTTGAATTTTCTGACTTAAAATGTGGTT TTCCTTGGCTAGAAGATGTTTTAAGCCCAAGCAGGCCAGTGGTATTTATTGATACTGGTTTGTAAATATCATTTTCCTTTTTCAGCATTGATCGAATAGG TCATTGTGGATAGGTTTGATTATATAATTGTTTGTTTTTTGGGGTTTTAGACATGTTGCCTGCTTTAGAGACAAGAGATCAGAAGATTATAAAAAACCCT CTTGAAGCTCACATAATTGCCGAGGTTTCAAAGGAATTGGTCAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29918; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_242600
| Blastp | DNA replication ATP-dependent helicase/nuclease DNA2 from Gallus with 28.9% of identity |
|---|---|
| Blastx | DNA replication ATP-dependent helicase/nuclease DNA2 from Xenopus with 28.52% of identity |
| Eggnog | Helicase(COG1112) |
| Kegg | Link to kegg annotations (423688) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452537.1) |
| Pfam | DNA replication factor Dna2 (PF08696.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |