Ll_transcript_242624

Id TrinityFTRINITY_DN53006_c2_g1_i20
Name TranscriptLl_transcript_242624
SequenceGTTTGATAAAATTAGAGAAATAGAGAGAGAGAAGAGAAAGGAAACTGAATTTTAAATTGTGTTTATTGATTGTAAAGTTATGTTTACACTTTAATGCAGG ATTTATATACCTGCTTCATTTCCTAACTAGATTGGTAACTGCCTAACTGAAAATATAGCTAATCTAACCATCTCTTGTGGCATAGCAAGAGGCCAACAAG AGTTACGTGAAGTTATTGTACTTCCCTCTAAACTATACAGGTATTGACCTCAGTGCATACATAAAAGTCAAAATTGCTATTTTGGTCCCTCTGACTTAGT TTATTTCCTCAATTTAGTCTCTCAAATGATTTTCCATCAGTTAGTGTTATAACGTCGTCAGCTTTGGCCTCAAAATGATGTTATTTTGGGTCTTCTTCTT CTCCACCGGATCTGCCATGGTTGATCCACCATTATTCTCCATCGGCATTAGCGAACTGGAGGAGAAACAGCAACCACTACCACCAGTAGTAACGGCAGCA GCAATGACAGCGTCAAAACCGACGGACATAGAAATGGAGAACAGGACCAAAATGGTGCCGTTTTGATGGGTTTATGGGAAAGTGATGGGAATTGACTTAT AGAAGGACTAATGTGAGGGCTTAACCAAAGTTGAGGTTGCTTCCAGTTTCAGTTGTGCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATCAAACGAGTA CTCAATTGCAGCTCTAACTGGAACCTTGCTTCACCAAATTTTCCAGGCTGGGCTTATAAAAGTGTCTCCCACGGTCAACTTCTTGGAAGAATATGCAGAA GTGGTATTACAAAGAAACGTTGAAAGTTTGTATGCATGCCAAGAAAATGAAGATAATGTTCGCAAAACCTTGATTAATTCTATCCCGAAATTATTAAGTT GGATCGGACAGTTCAAGAATACAGAGGAACGAAAAAACCCCAATGTTAATTTCAGATTTGATAATTGCCCAAAGAATGTTATCATATCTGAGGTAATTGA TATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAGGGGATGATTGATTCTTCTCTTAGAGTGAAAGTTCAATCAGCAAAAGATGAAGGAGAGAAG ATCATGCCATTAGAGTTCAAAACTGGAAAGTCATCAAATAGCCAGTCATTAGTAGAACACCGTGCTCAAGTAATATTGTACACTCTCCTGATGTCTGAAA GGTACCAGAAGACTATTGATTCTGGTCTTCTGTACTATCTGCAATCAGATCAGACACAGGGTATTGTTGCTGAAAGATCTGACTTAGTGGGATTAATAAT GCGACGTAATGAGCTAGCCAGTGATATTCTTAAGGCATTGACCTTGCAACAACTGCCACCAATGTTACAGAGTCCTAGCCTTTGCAGAAGTTGTCGCCAT CTTGATGTTTGTAGCATTTATCATAAGGCACATGGTGGAAGCACAGAGGGCAGTGGGCTGGGAAATGTGTTTGATTCTCATACTAATCACCTGACATCTG CTCATTCTAAGTTCCTCTGCCATTGGGATCGACTGATTGACTTAGAAGCTAAAGGGACTGAGCTTTTAAAGAAACAAGTATGGCGATCACATGGCTTGAA GAATCCAATCAATGGTGGCCTTTCCTCTATTGTTCTTGATTCTTCACATGGAATTCCTCTAGATAAATCTCCAAAAGACAATTATTTCATCTATTGTTTT GTACGACAAGATACTTCACGTCTCTCTGAAGTATCAGATGGTGATCCTTCTAGTGCTTCTCCAAATGATTTAGATCTCACACTTCGAAGTGGAGACCACG TGATACTGAGCAATGGATCTAGCTCTCAAACTATTGCAAGGGGGGTGATCTCAGATATTAGTCCGTCGCATGTATCTGTTTCCTTTTCTAAATGCTTAAG AATTCCTGGGAGGTCTTCCACTACACATGATCTCCTTGAACAGGTTTGGAGACTTGATAAGGATGAATATGTCACATCATTTGCAATTATGAGGTTTAAT CTTGTACAAATGTTTTTGCAAAATGATCAAAGTGGTCATCTGCGGAGAATGATTGTTGACCTAGAGGCTCCTAGGTTTGACAGTGGATCTATAGTAAGCC AGGATCCAGCGATATCCTATGTTTGGTCAGAGAAGAGTTTGAATGATGATCAACGTAGAGCAGTTCTTAAGATGCTTACAGCAAAAGATTATGCACTTAT ATTAGGGATGCCTGGAACGGGGAAGACATCCACAATGGTTCATGCTGTGAAATCCTTGTTGATTAGGGGCACATCCATTTTGCTGACGGCCTATACAAAC TCTGCTGTTGATAATTTACTCATCAAATTAAAAGCACAGGGAATTGATTTTGTACGTATTGGAAGAGATGAAGCAGTGCATGAGGACGTCAGAGAACACT GCCTTTCAGCAACTCATGTAAAAAGTGTTGAAGATATCAAAATAAGGTTAGAACAGGTCAAAGTTGTTGCAGTTACTTGTCTGGGCATTTCCAGTCCTTT ACTTGCTAACACAAGGTTTGATGTATGTATTATGGATGAAGCTGGGCAGACCACTCTACCGGTATCCTTGGGCCCTCTAACTTTTGCTTCGGTGTTTGTA CTTGTTGGGGATCATTATCAACTACCTCCACTTGTCCAGAGTACAGAGGCACGAGAGAATGGCATGGGGGTAAGTTTGTTTCGTAGACTCTCAGAGGCAC ATCCACAAGCAATTTCAGCATTACAGAGTCAGTACCGGATGTGTCAGAGCATTATGGACCTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGG TTCGTCCGAGATAGCTAACAGAAAACTTGAATTTTCTGACTTAAAATGTGGTTTTCCTTGGCTAGAAGATCTTTCAGGGATGAAGGGTAAAGTTCCAGTT TTAATGTAATTTTAATGAACTTCACAGCCATCAAAGATAAAAGGTTTTAAGCCCAAGCAGGCCAGTGGTATTTATTGATACTGGTTTACATGTTGCCTGC TTTAGAGACA BLAST
Tissueflowers
Gene nameLI_gene_29918; 
Additional informationdetails; 

Expression of Ll_transcript_242624

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_242624
BlastpDNA replication ATP-dependent helicase/nuclease DNA2 from Xenopus with 35.7% of identity
BlastxDNA replication ATP-dependent helicase/nuclease DNA2 from Xenopus with 34.2% of identity
Eggnog-
KeggLink to kegg annotations (378492)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452537.1)
PfamDomain of unknown function DUF83 (PF01930.16)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;