Id Trinity | FTRINITY_DN53041_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_240989 |
Sequence | TTCTTTCCCACTTTCCAAATCTAAACCATGCATACCATACCACATGGAACCTCTTTTCCTCATGCGCCAAATTCATGTTTTTCCACTTGTTTTTTTGAAT GACAAAATTGTAACTCCATTATAATCAAAGAGGTAGATGTGTCATTAAATATTGTATTTCTCTTTGTTTTTTGAAACACTTCATCTCCATACTCATCCCT CACACTCTATCCACTTCTCAAAAGGAATACCTTAACTTCCAATTCACTCTCCTTTGCATCTTTACCTCATCATTTTATTACTATTCATATTAATCATTCA TTTTCAATTAATTATCATAAGTACACACTTTATCCTTCCACCTTTTATTTTATTTATAATAAATACTTCAATCCCTCCTTTCAATTTTCTAACTTTTCTT TCTTCAACTTCAAATATTTAAGGAGGAAAAAACAATAATAAAAATAATAAAGGAGTACTTGTGTTGATAGAATAGAACTCATTTCCCAAACCCAAAACCC TACCCGCCATGGCGTCCTCCTCAATTCGCCTCCGCCGCCCCCTCTCTGCCGCTCTCTCCACCTTCCACCGCTCCTTATCCACTCCTATCCACCGCCAACA CTTAACACCGAATCATTATCATCTCCATGTCCTTCAAACTCCTCCTCCTCCTCCTCCTCAATTTCAATCCACTCGTGCATTCAGATCATCACCGATTTCG CTTCTCTCAACTCGCCCTTCCTCCTCCAACGACGAGATAGGTCCCGATACCATTCTCTTTGAAGGTTGCGATTACAATCACTGGCTCTTCGTCATGGATT TCCCTAAGGATAATAAACCTTCACCTGAAGACATGGTCCGTGTTTATGAAGACACTTGTGCTAAGGGTCTCAACATCAGTGTGGAAGAGGCGAAGAAGAA AATGTATGCTTGCAGCACTACCACTTACACTGGCTTTCAGGCTGTCATGACTGAAGAAGAGTCCAAGAAATTTGAAAGTCTTCCTGGAGTCATCTTTGTG CTACCAGATTCCTATATTGATCCTGTGAACAAGCAGTATGGAGGAGATCAGTACATTAATGGAACGATAATCCCTCGACCTCCACCGGTACAATATGGAA GAAATCAACGAAGACAAGATGACCGAAGAGGTCCAGGTCGATATAACCAGCAAGGAAATCAAATGTCAAACCCTCAAGAAAATTTCTCCTACAATAGTCG GGGGCCTGTGCAAGGGGATGGAAGGAACTATGGTCCTGCACAAAATTATTGTCAACCCCAACAGAACTATGGTCAACCATCGCAGAATTTCCCTCCCCAA CAGAACTATGGTCAAGCATCACCTAATTATCCACCCCAGCACAACTATGGTCAAGCATCACAGAATTATCCACCCCAGCAGAACTATGGTCAAGCATCCC AGAATTATCCACCTCAACAGAACCATGGTCAAGGATCACCAAATTACACAACCCATCCACAACAGCAAAGGCATGGGCCCAGTTCACCACAATATGCACA GCAGCAGAATTTTGTACCATCAGGACAAGGAGAAAGAAGAAGCTATGTGCCACAGCAGCACTTTGGACCACCTGGACAAGGAGAAAGAAGAGATCCTGCT ACTAGTCCTGGAGGAACTGGAGCTTCTCAATCTTGGGGTGACACTTCTTTTACCCCATCCTCTGTGAAGGATTTCAAACCATCATATATGGAGGAATTTG GACAAGCTAACCAGGGGAATTATCCTCCCAAAGAACAGGCAGAGTCCCAACAAAGATATCCACCTCCTGGCCAGGGTAATTTTACTGGACAGGGAAGATA CTGATAGTAGTTTGAGACATGCATGCCGTTGGTATTGAAGTTTATCAAGTGCTTTCCAATGTGGTTGAAAATTGAATTTTTGGAGTTGTCATTGTATATC CGTCAATCTAGTTAATGTTCTTTTTCAGTGACAGATAGATGTGGGGTATGTGAAATTAAAAATGATTGTTGAACTTTGAATTTCATGTTCCCTTTCTCTG TCAATTTAAATGTCTTCCTAGTTCCTTCTTTGTTTGCTTTCATAAATCTTTAATGCACAATCTATGCAATTTATCATTCCTTAAATCACTACTATTTTAG AAGCATGCTTATAAATACATGGTGCCTGTGAGAAGCTAGAGGAAGGACATAATATGTTATTTGTAAATTAAGCTACTGCTACTGACATACCTGATCAGCT ATCGATAATAATGTTTTTGTATGAGTTTTCGTGTTTAATATGGAAGCCTTTTTTGGGTGTAATTTAATTATAATTTTTTTGTTTTAGTTATAAAAAAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_30264; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240989
Blastp | Multiple organellar RNA editing factor 1, mitochondrial from Arabidopsis with 48.8% of identity |
---|---|
Blastx | Multiple organellar RNA editing factor 1, mitochondrial from Arabidopsis with 46.73% of identity |
Eggnog | NA(ENOG410ZPPQ) |
Kegg | Link to kegg annotations (AT4G20020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418462.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |