| Id Trinity | FTRINITY_DN53044_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_240578 |
| Sequence | GAATTTTTTTTGCGGAATTCAGAAACAACTTTTTCTCCTGGACTCAGCAGCATAAAGCGCCTCTTCATGAGTGTTTGATAAATCAAATTCAGATTTAGGC GAAGAAATATGGGCGCAGAAGCACAAATCTGCAGAAGCTTAATCAACAGAATCTACGCTCCATTAGCCAATGAATTTCACTTCGCTATGCCTCTCTCCTC CTTCAGAACAAATGAACTCGAACTCGTGCGAGGCGTTCTACGAATGTTGCAAGGGTTTTCTGGTTCCTTGTTCTGTTGGGATCATAGTGCAAACACATTT CGGTGCAAGAGTGGAGTATACGTGAATCATTTGTCACTGAAAAGTCTCCACTCGCTTCTCAATCATTTCATCCATGCAGCAACGTGTCTCCAATTGGTAG AGATCATTGTCAAAAAAGTTGAGACTATTGGTTCAAAACCTCCTCCTCCTACTTTGATGGCTTTTGTGTGCTCTGCTTCGGCGTGGCTTAAGCGGTTACG GAATATTGCCTTGAAGGAGGAAATGTCCTTGAGCAATGTAGATGGCATGACCACTCCAACCTTGCTAGGATTGGAAAATTCTTTATCGAGTCTTTGCTCA GGTGCCGAGTTCCTATTGCGAATAGTCTATGAGGCCATCCCTATGGTATATTTTGAGTTTGGTGTATCTGTACCAGCAGCAGAACTAGCTATTCATGTGC TTGACTATCTTCATGAGAAGCTTGATGAAATGTGTCTTGTACAAGGTGGTGAGGAGGAAGCTTATCAGATGGTTCTTTTTATGTACGTTGGGAGCTTATT GCCATATATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTTGATGATCCTTCTGATGAGATGTTCTTTTTTGCTAATAAAGAAGTCACAGTTGCT GAGGCTGAGTTTTGGGAGAAGAGTTATTTATTAAGAATGCTACAACATAGTAAGTTAGATGCTGAGTTCTCTTCCACTAATTATGTCGGAGATTCTGTGC CAGCATCAAATGGCAAGAAGGAAGTGCACAGGAGGGGTTCAGTCTCTTTGTCTGGTACAATTAAAGGAAAAGAGCAGGGCATTGGTGACCATCCAGCTTG TCCATTTTTTATTAAGGATTTAGCCAAGTCAATAGTTTCTGCTGGAAAATCTTTGCAGTTGATGCGCCATGTTCGTAATTCCATGGCAGTATGTAGCAAA GAAAGTGATTGTGAGATTGGAAGTACCAAATATTTTAGTTATGGGCAGAGGATGGCTGGGCTAACCTTGTCAGAAGTTTTTTCTTTATCGCTAGCTGGAC TTATAGGTCATGGTGACCATGTTTGTAAATACTTCTGTCAAGATGATTGGTTCGAATCTGTATCTGTTTCTTCCTTTACATCTTATGGAAATGAGGAAAA AATAGATAACGTTAATATTGGAAATTTAACTGCTCTGCCATACTCAGAGAAGATTTGGTTTAAGTTCTTGATTGATACGTTATCCGAGAAGAGATCAGCT GATTTGAAGCTAAAATATGAAGACATAAATAACACCACAAGAGATCAGAGAGGGGTTCGAGTTGTTGACGACGAATTACTTCTCTTGAGATCGCACATAG AAAATCCGGTTATTACAGTGTGTCGAAAAAACCTTGGAAAGAATGGGGATGCGTTTAAAACATTGAATTTATCTGACAAGTTCTGTCTGCCTTCTTTGAA CGATGAGGTTTTGAGAAAGGCAATATTTGGTGGAGACAGTTCAGCATTTTCTGATAGTAAAGGAACAAACTATGCTTTCGGTTTTCGGTTTGGTGAATCT GAATACCGTCACTCACAGGATGAAAGAAAACTGTTAGAAATGTTGTTTCCTTTTCCCACCCTTCTGCCTTCGCTTCAGGACGATCTTCCAGTGTCAGAGT ATTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAAAAGTTCTTCGTTGGATGCAAAATGTTGACCTAAGAACTACTCCACTTCCTCTGGTTATTATGCA GTACTGTCTAACCATCTACATTCAGAAACAGGTGGATTATATTGGAAGGAATATGCTATTAAAGTTGATGAATGAATGGAGGTTGATGGATGAGCTTGCG GTGCTGCGTGCCATATACTTGCTTGGTTCAGGTGATTTGCTACAACACTTTTTGACTGTAATTTTCAATAAGCTGGATAGGGGTGAAGCATGGGATGATG ATTTTGAATTAAACACAATATTACAGGAATCAATCAGAAACTCTGCTGATTGTATGTTGTTAAGTGCTCCAGAGTCTTTGGTAGTGTCAACAACCAAAAA TGTCGTTGACAGTGATGAGCAAGCTATCACAGCTGGTGTTGTGTTGAGTACCCCTCATAAAAGTCATGTCAATAGCTTTGGAATTGATGGCCTTGATTTG TTGAAATTCACATATAAGGTCCCTTGGCCTCTTGAACTCATTGCTAATACGGAGGCAATTAAGAAGTATAACCAGGTTATGTGGTTCTTGTTGAAGGTCA AGCGTGCAAAATTTGCATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATCTGCATCAAACAACAGAAAACATCATTGGTTAGTGGAGCAGAA ACTCCTTCATTTTGTTGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCTTGAAATGTGTGAAAGTATGACAACAGCCAAATCT CTTGATGAAGTCATTGAAGTCCATGACGCTTACATATTATCAATTCAGCGACAGTGTTTTGTAGTTCCTGATAAGCTGGGGGCTCTGATTGCCAGCCGCA TTAACAGCATCCTTGCCTTAGCTTTAGACTTTTATAACATACAACAAACATTTAGTAGTGGTGGAGCTGTTTCTGCAATCACCGCCAGATGTGAGATGGA AGTGGACCGGATAGAGAAACAGTTTGATGATTGCATCGCTTTCCTACTGAGGGTCTTATCTTTCAAACTAAATGTGGGGCACTTCCCTCATTTGGCTGAT TTGGTCACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGAGGACTGCCTCCAGCTCTGGAAGTGTCACTTCAAGATTAGCCAAGA CCTCTGCTTAAATTGTTTGATCTAAAGAGGATGATCATGACATATATCTGAAAAATATGAGAATAGTTTTTCACCTTCTTTTATGTTGTATAGTTTTCTG AGAGAGAACATCCTCTATCTGCTTCGTTTTTAGCTTACTTTCTGTTTGAATTGGGGAAGAATACGGAAAAGGAGAAATTTGAAAGGAAGAACCTGGTAGA AAGAAAGTAGTAAAAAAGTGAATATTGAAGACTGTTTCTGTTTGGCATGAAATAATTCAAAGGGAAAGAAAATGACTACTTTTAACTGCCAATTATGCCC CCGTGATGAGTTGTGGATGGAGGCAAGGACCACAGAATTACAATAATATATAGTTTGTATCGTCCATTTAATCAAAGCCAAAAGTCCCATTTGTCTACAT CTTGTCTTATGATGTCTACACGATTTGTATACTTTGGCACATTGAAAGCCCCAAAGACAAATTGTTTATCCACTCTCGCAGTAAAACAAGGTTCGAGTAT CT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30282; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240578
| Blastp | Gamma-tubulin complex component 5 from Mus with 28.93% of identity |
|---|---|
| Blastx | Gamma-tubulin complex component 5 from Mus with 28.93% of identity |
| Eggnog | Tubulin, gamma complex associated protein 5(ENOG410ZYW9) |
| Kegg | Link to kegg annotations (233276) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416744.1) |
| Pfam | Spc97 / Spc98 family (PF04130.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |