| Id Trinity | FTRINITY_DN53045_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_240843 |
| Sequence | TCAGGTTCTTGAGAAGGCATTTGCAGTAGATAGTTTTGGAGAGGTTGGAGTTTTATATAATATAAAACAGCCTTTCACAGTTCGAACCACAGAGCTTTCT CAAATTTTAAGGCTCAACAGAACATCCTTAAAGAATGTTTTACAAGCAAAACCAGGAGATGCACAAATTGTAATGCAGAACCTTTACATGGTAATAAGAA TGCTAAATATGAGAGACAATATTGTATAAACTTCATTTGTTGCATTTCCTCAATAATAATATAGGTTCCTAATCATTGTTGTCCATGTTGACAGAAGTTA AAGGGGCATGAATCATTGGGATTTGAATATCTAGATATAGATCCTGGATTGGTTCTTCATGAAGAGCTTGATGGAGGTAACACAAGAAGAAGCTCTTCAA ATGCATGTACAAGTCATTCTCAAGAACATTCACCAATACAGGAAGAGAGGTACAAAATTCTTACATACTCCGAGGCCAGCACGCTTAATGTGACTAGTGA AGATGGTTTAATCACTAAACATAACATGATTCCCCGGGACGGGAAAAGAGATCTTCATGCTGATTCAGACACAGAAAATCTTGACATGGTTAAAATTCTG CTTGAAAGAGATGCAAATGATAGAGAAGCATATTCAAACTCCTACTCAAGAAAATCTAACTGTCCAAATGATAGAGAAGCAACAAGGTTCACCAAGAAGA GAGTAACAATTAACTCAGTATGCGTATGCAGGAGTATCATAAAAGGACAGCACGGAAAGCTGATAATCCTACCTGATTCATTAGAAGAGTTGCTCAAAAT TGCGGGTGAAAAATTTGGAGGCTTCAATCCCACAAAAGTACTTAGTACAGAGAACGCAGAGATAGATGATATAAACGTCATTCGAGATGGTGATTATCTC TTTCTTCTCTGCAGCAATTGTGAAAATTTGACATTGTAATGTACCACGGTAAATATGATGATAGATGTCACCATTAGAAAGGTACTGATAAGGGTGCAAC CAAATACTATAAAAGCTAATCATTCAGCAAGATATTGGAAGATCATACAACTCAATTACAAAAGCTGCTCTTTGTTTATGGTTGTTGAAACAAAATTTTA CAATCTCATCAAGATAGGGCTGGTCATAAGCCCAAGAAATAAGTCATATAAACAAGTGAAGACCTGAAATGTGTTTGAAGATGTATTGCATGATTAGAAG TATTTGACCCTTTGTATGATCCTGAGAACCCAGTTAATCAATGCCTTTACAACTAGAAGTGCCCTTGCGAAGTGTAAGAGATGCACAATTAACTTCAAAA AAGCACCCCCCTTGGTGCCACCACTCTCTGGATCTCTAAAAACTGTGTATATTGAAAGCTTTCGATGAATAAAACTCACTCCTTCAAATTTATTGGTATA GGATGTGCTTCTGTGTTAATAACAAATTTATCCAATGGAATATTTCAGTGTTTCTCCTAGAAAGAAAGTTTCCATTTTGTCTCTTCTATGAGCAAGAATG CTAGTTATGTCGTCCAGACTCCAGAGAGCAATATCCACCAGTACCAACCTTTGTGTGCTTCTCAAAAACTTCAAAGATTTGCCAACCTCATTCACCGTAT CTGTAACACAAGATACATATATCTGATTATTTCAGAAATATTTAACCAATATTTTGTGTCTGCTCACAAGAAATAAGAATATAATTTAACCTTATACATG CGAGGGGGAAAACATACTTTGGATCTTCTGTAATGCGGTACAAAACGAACAATGACTCCACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30288; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240843
| Blastp | Potassium channel KAT1 from Oryza sativa with 59.15% of identity |
|---|---|
| Blastx | Potassium channel KAT2 from Arabidopsis with 53.03% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (4328864) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417979.1) |
| Pfam | KHA, dimerisation domain of potassium ion channel (PF11834.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |