Ll_transcript_242488

• Id Trinity: FTRINITY_DN53051_c1_g3_i1
• Name Transcript: Ll_transcript_242488
• Sequence: GAAAAAGGGAAGAGCACATAGGAAATGGAGAAAGATGGTCTCTTACAAGCTCCACTTTTTTCTCTCTTCATTATATCTCTCTTTCTATTTTTCTTTCCTT AGATTTTCTCATAACCCAAAAAAATACACACTCTCTGCTTCATCTTAACCCTTAAGATCTGAAAGTCAATACCTTTTTCTATATCTCTCTCTCTCTGAAC TTTGATGTTTTTATTGAATAATGAATCTCGTGCTAATGAAAACATGTCCCGTGAGTTGGATCCGTTAAAGCAGCTAGCAACATCTCCAACACTCTCTCCT AATTTGATAAACTCATCTGAACCTAATAGCAACAAGATGAATCACTTGACTATTGATACCGAAGATTCTTTTGCAAGCTTGCTTGAGCTTGCGGCCAATA ACGATGTTGAAGGTTTCAAACGATTGATTGAGTGTGACCCTTCCTCTGTAGATGAGGTTGGGGTATGGTATAGTCGTCGGAAGGGATCAAAACAAATGGT CAATGAGCAAAGAACTCCTTTGATGATTGCTGCTACTTATGGTAGCATTGAAATTATGAAAATGATTCTTTCACTATCCGATGCCGACACTAACCGCTCT TGTGGACTTGACAAGAGCACTGCCCTTCATTATGCGGCATCTGGTGGGGCTGAAAATGCTGTTGATGCTGTGAAACTACTTCTGGCAGCAGGGGCTGATC CGAATTCGGTGGATGCCAATGGGCATCGTCCAGCGGATGTTATTGTTTTCCCTCCCAAGCTTCAACATGTCAAAAACAGTCTTGAACAACTTCTTCAAAC TGATGATTCTATTGCTGTCTGCAATCTTAGGGTGATTACAACCTCCTCATTCAATTCATATTCTCCACCTTTATCAAACTCACCGGAGAATGGGTCTCCT TCTGCATCGGATTTCCAATTGAAGTTGAAGTCAAATGATGTGCCTATTTCTTCTGCATCCGAGAAGAAAGAATATCCTATTGATCCTTCCCTTCCAGACA TCAAGAACAGCATATATTCAACTGATGAATTTCGAATGTATTCTTTCAAGGTTCGACCATGTTCTCGTGCTTATTCACATGATTGGACTGAATGCCCCTT TGTCCATCCAGGGGAGAATGCTCGTAGAAGGGATCCAAGAAAGTACCATTACAGCTGTGTACCTTGTCCCGATTTTCGCAAGGGTGCTTGCCGTCGTGGA GACATGTGTGAATATGCTCACGGGGTTTTTGAGTGTTGGCTGCATCCAGCACAATATCGAACTCGCCTCTGCAAGGATGGGATAAATTGCTCCAGAAGAG TTTGTTTCTTTGCACACACTGCTGAAGAGCTTCGGCCGTTATATATTTCAACTGGTTCTGCTGTTCCCTCACCTCGCTCAAGCACATCTTCGGCCATGGA TTTCGCTGCTGCCATGAGCATGTTGCCAGGCTCTCCATCCTCAATGTCCGTCATGTCGCCTTCACCATTCACTCCACCTATGTCACCTTCTGCTAACGGC ATGCACTCTTCTGTTCCTTGGCCGCAGCCGAATGTCCCAGCCTTACATCTTCCGGGAAGTAATCTTCAGTCTAGTCGTTTGAGATCTTCACTCCATGCTA GAGATATTCCTATGGATGACTTTGACTTGTTATCTGATTATGATCAGCAACAACAGCTCCTAAATGAGTTATCTTGTCTCTCTCCACAGCATCCTATGAA TTCTAATAATCTGAACCGCTCAGGTCGGATGAAACCCCTGACTCCTTCAAATCTTGATGACCTCTTCTCTGCCGAGAGTTCTTCTCCTCGATTTGCTGAT GGTTCACTGGCTTCAACTGTTTTTTCTCCAACACACAAATCAGCCGTCTTTAATCAGTTTCAGCAGCATCAAAGCATGTTGTCGCCTGTGAATTCTAATT TTTCTCCTAAAAATGTTGAGCATCCTTTGTTGCACAGCGCCTCTTTCGGGGTTCAGTCACCAGGAAGAATGTCCCCACGAAACATGGAACCTATTTCTCC GATGAACTCTAGGATGTCTATGCTAGCTCAGCACGAGAAGCATCAACAATTTCGTAGCCTTAGCTCCCGGGATCTCGGCTCCAACTCTGCTACGGCTGCC TCAGCCAACTCTTGGTCAAGGTGGGGATCCCCGAATGGTAAGGCAGATTGGGCACCTGGTGCAGAGGAATTCAATAAGCATCACCGCAGATCATCTTCTT TCAAGCTCGGGAACAATGGCGAGGAGCCGGATTTATCATGGGTTCAATCACTTGTCAAAGAATCTCCAACCGAGATTAAAGAGAAGTTGACCACCAATGT CCCAACTGTTGCAGCAGCTGGATCCTCGAGCGAGGGGTCAAACATAAGCGCATCACAAATAGACTCAGTGGATCATGCTGTCTTGGGAGCATGGCTTGAA CAGATGCAGCTCGATCATCTCGTGGCTCAGCAAAACTGAAACGAGTTTTACTGACGAGGCAGGTAACAACAGAAAGGGTTTCCAGTAAATAATATATCCA TGCTTTTTCGAAGTTTTGTTGATGGCGGGTTTCGGGTACTAAGAAAAAAAAAGCAGTATGAAAAAAGAATCACCTGAGTTAAATTCATTTTCATATTTAG TTTTTTTTTTACTAAAGTAACTTTAGCATTCACATTCCTGTCATTTTTTTTCTTCCATAAGGAGCAAATGTTCTATAAAGATGAATTCCTATTCCTAAGT TTGATTTATATCTTTCTCTTTTAATTTTGACATTTGGGTAGAAAGACATTACAAAAGGGTCATTGGAATTAATTACTTTGTCTCCATTTTGATCCATTTT TGGGGATTGTGATATTTCTGATATAATCAGGAATCAATAATTGTGGATGACAGGGAGTGGATAATTTTTTAGGACTATTTGAAGGTTGATCTTTTTGGTC ATGTATAACATTCAATTAAACTTTATTCCTATTTTATTCTATAATACCTTTATTATTATTATTATTTCTATATTCAAGCCTATCTTTCTTTCACATTGTT TTCTATTGTTGTTAATATTATATTTTTTTTTGCATGAATGAGGTATTGAATCCTTTTTATGGATATGGTACTATAGTTTGTGCATGGATTAAATACCATT ATAATGATTCTTTGTTTTTGCATGATGGATGAAACACTATGTTATTTTATCTTTGATGATAAGTGATAACTTTGGCATTTACAATTATTGGCATCCTACT CGATCAGCATATTATTATTGGAGTGGTATAGATCTGTTATCTTTGCAAGCAGATAAGTTGTTTCGAGAATTTGAACTTATTATCTTAGGTCTCTTAATT
• Tissue: flowers
• Gene name: LI_gene_30348;
• Additional information: details;

Expression of Ll_transcript_242488

FPKM

• FPAB: 12.5
• FPNAB: 34.1
• LF1: 6.6
• LF2: 8.5
• LF3: 9.9
• LF4: 6.8
• UF1: 5.3
• UF2: 7.5
• UF3: 9.3
• UF4: 6.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_242488

• Blastp: Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 62.57% of identity
• Blastx: Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 58.12% of identity
• Eggnog: nucleic acid binding transcription factor activity(ENOG410Y7IC)
• Kegg: Link to kegg annotations (AT2G41900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456087.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;