| Id Trinity | FTRINITY_DN53051_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_242491 |
| Sequence | CTAGTTTTCAGGAGAAGATGAGTTCTTTTCCATTTTGTATATTTGTTTGTTCCAGTTGTTTATTTATCAAAAAAGCTGTGAATTTTTTCATTTATAAGTA TGAGCTAATTATGAAAAAAATCACTTTTTTGTAATCCTTTCTTTTTCTCTAGTTTACATGTTATACTTGATTCTTTGCTACCTAGAGTATCTCGTAAATT TCATTTGTTTGTTTGTTCAATAAGCGTGTCGTGTAATCAGATGGTGTTTATGCATTAATTTGCTTCGTCGTTCTACTTCTTGTTTGATACAATTTTAGTT CTGCCTTGTCTTCAAATGCTAGCTGTAATGGGTTTGTGTTTTTTCCCCAGCAGAATCTCGTGCTAATGAAAACATGTCCCGTGAGTTGGATCCGTTAAAG CAGCTAGCAACATCTCCAACACTCTCTCCTAATTTGATAAACTCATCTGAACCTAATAGCAACAAGATGAATCACTTGACTATTGATACCGAAGATTCTT TTGCAAGCTTGCTTGAGCTTGCGGCCAATAACGATGTTGAAGGTTTCAAACGATTGATTGAGTGTGACCCTTCCTCTGTAGATGAGGTTGGGGTATGGTA TAGTCGTCGGAAGGGATCAAAACAAATGGTCAATGAGCAAAGAACTCCTTTGATGATTGCTGCTACTTATGGTAGCATTGAAATTATGAAAATGATTCTT TCACTATCCGATGCCGACACTAACCGCTCTTGTGGACTTGACAAGAGCACTGCCCTTCATTATGCGGCATCTGGTGGGGCTGAAAATGCTGTTGATGCTG TGAAACTACTTCTGGCAGCAGGGGCTGATCCGAATTCGGTGGATGCCAATGGGCATCGTCCAGCGGATGTTATTGTTTTCCCTCCCAAGCTTCAACATGT CAAAAACAGTCTTGAACAACTTCTTCAAACTGATGATTCTATTGCTGTCTGCAATCTTAGGGTGATTACAACCTCCTCATTCAATTCATATTCTCCACCT TTATCAAACTCACCGGAGAATGGGTCTCCTTCTGCATCGGATTTCCAATTGAAGTTGAAGTCAAATGATGTGCCTATTTCTTCTGCATCCGAGAAGAAAG AATATCCTATTGATCCTTCCCTTCCAGACATCAAGAACAGCATATATTCAACTGATGAATTTCGAATGTATTCTTTCAAGGTTCGACCATGTTCTCGTGC TTATTCACATGATTGGACTGAATGCCCCTTTGTCCATCCAGGGGAGAATGCTCGTAGAAGGGATCCAAGAAAGTACCATTACAGCTGTGTACCTTGTCCC GATTTTCGCAAGGGTGCTTGCCGTCGTGGAGACATGTGTGAATATGCTCACGGGGTTTTTGAGTGTTGGCTGCATCCAGCACAATATCGAACTCGCCTCT GCAAGGATGGGATAAATTGCTCCAGAAGAGTTTGTTTCTTTGCACACACTGCTGAAGAGCTTCGGCCGTTATATATTTCAACTGGTTCTGCTGTTCCCTC ACCTCGCTCAAGCACATCTTCGGCCATGGATTTCGCTGCTGCCATGAGCATGTTGCCAGGCTCTCCATCCTCAATGTCCGTCATGTCGCCTTCACCATTC ACTCCACCTATGTCACCTTCTGCTAACGGCATGCACTCTTCTGTTCCTTGGCCGCAGCCGAATGTCCCAGCCTTACATCTTCCGGGAAGTAATCTTCAGT CTAGTCGTTTGAGATCTTCACTCCATGCTAGAGATATTCCTATGGATGACTTTGACTTGTTATCTGATTATGATCAGCAACAACAGCTCCTAAATGAGTT ATCTTGTCTCTCTCCACAGCATCCTATGAATTCTAATAATCTGAACCGCTCAGGTCGGATGAAACCCCTGACTCCTTCAAATCTTGATGACCTCTTCTCT GCCGAGAGTTCTTCTCCTCGATTTGCTGATGGTTCACTGGCTTCAACTGTTTTTTCTCCAACACACAAATCAGCCGTCTTTAATCAGTTTCAGCAGCATC AAAGCATGTTGTCGCCTGTGAATTCTAATTTTTCTCCTAAAAATGTTGAGCATCCTTTGTTGCACAGCGCCTCTTTCGGGGTTCAGTCACCAGGAAGAAT GTCCCCACGAAACATGGAACCTATTTCTCCGATGAACTCTAGGATGTCTATGCTAGCTCAGCACGAGAAGCATCAACAATTTCGTAGCCTTAGCTCCCGG GATCTCGGCTCCAACTCTGCTACGGCTGCCTCAGCCAACTCTTGGTCAAGGTGGGGATCCCCGAATGGTAAGGCAGATTGGGCACCTGGTGCAGAGGAAT TCAATAAGCATCACCGCAGATCATCTTCTTTCAAGCTCGGGAACAATGGCGAGGAGCCGGATTTATCATGGGTTCAATCACTTGTCAAAGAATCTCCAAC CGAGATTAAAGAGAAGTTGACCACCAATGTCCCAACTGTTGCAGCAGCTGGATCCTCGAGCGAGGGGTCAAACATAAGCGCATCACAAATAGACTCAGTG GATCATGCTGTCTTGGGAGCATGGCTTGAACAGATGCAGCTCGATCATCTCGTGGCTCAGCAAAACTGAAACGAGTTTTACTGACGAGGCAGGTAACAAC AGAAAGGGTTTCCAGTAAATAATATATCCATGCTTTTTCGAAGTTTTGTTGATGGCGGGTTTCGGGTACTAAGAAAAAAAAAGCAGTATGAAAAAAGAAT CACCTGAGTTAAATTCATTTTCATATTTAGTTTTTTTTTTACTAAAGTAACTTTAGCATTCACATTCCTGTCATTTTTTTTCTTCCATAAGGAGCAAATG TTCTATAAAGATGAATTCCTATTCCTAAGTTTGATTTATATCTTTCTCTTTTAATTTTGACATTTGGGTAGAAAGACATTACAAAAGGGTCATTGGAATT AATTACTTTGTCTCCATTTTGATCCATTTTTGGGGATTGTGATATTTCTGATATAATCAGGAATCAATAATTGTGGATGACAGGGAGTGGATAATTTTTT AGGACTATTTGAAGGTTGATCTTTTTGGTCATGTATAACATTCAATTAAACTTTATTCCTATTTTATTCTATAATACCTTTATTATTATTATTATTTCTA TATTCAAGCCTATCTTTCTTTCACATTGTTTTCTATTGTTGTTAATATTATATTTTTTTTTGCATGAATGAGGTATTGAATCCTTTTTATGGATATGGTA CTATAGTTTGTGCATGGATTAAATACCATTATAATGATTCTTTGTTTTTGCATGATGGATGAAACACTATGTTATTTTATCTTTGATGATAAGTGATAAC TTTGGCATTTACAATTATTGGCATCCTACTCGATCAGCATATTATTATTGGAGTGGTATAGATCTGTTATCTTTGCAAGCAGATAAGTTGTTTCGAGAAT TTGAACTTATTATCTTAGGTCTCTTAATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30348; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_242491
| Blastp | Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 62.57% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 58.12% of identity |
| Eggnog | nucleic acid binding transcription factor activity(ENOG410Y7IC) |
| Kegg | Link to kegg annotations (AT2G41900) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456087.1) |
| Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |