| Id Trinity | FTRINITY_DN53062_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_240706 |
| Sequence | GAAGACTATTGAAGGAAAGGAAGAGAGAATTTGTGAAGAATGAAGGGAGTAATAGTTAAGAACAAGAATGTTAGGGTTAGTGAAGAAGAGGAAGAGGAAG AAGAAGAAGAAGAAGAAGATCACAATTCCGCACCTCGAAAGCTATATTTACATCATTCTGGTGATGATGGTTTCTATGATGTTGAAGCCATTCGCCGCAA GAGGATCCGCAAGGGTGAGGTCCAGTACCTTGTTAAATGGAAGGGATGGTCTGAGGGTGCCAACACTTGGGAGCCTCTCCACAATCTCCACTCTGTCTCT GATCTCATCCACTCTTTCGAGCACAAACTTAAATCAGGGAAACTCGGTAACCGCAAACGCAAGCATCACCCTGTGCTTCATCAACAAGAGCAGCAGCAAC AGCAACAACAACAACAACCACCACCAAAGAAGAGGCCGCACCAACAGCAACGTGCTCCCACTTCTTACTGCCTTAGACATTTTGCAGCTGATAACAGCCA GACACACTCTGCTCATCACACTATCAATCTTGTCCATCCTCTTGCTCAAGACAACCAACCAAATCAAAATGAAAGGAACGACGAGGAAAACATTGATGAT CCAAAGCTTAGTGAGCTTAAGGCAACATCAAACAATGCCCTAGATGCTGCTGCAGATAAGCCAGAGGCTTCAACAGCCAACCCTCACATGGCCATGGAAT CTGGCCCCTGCAGAGGAGCCAAAAGGAGAAAATCTGGTTCTGTGAAGAGGTTCAGGAGACAGGATGATGATGGTGCATCTAAGTCCAACCCAACCACCGT ATCAGTTGAACAAGGACAAAGAGGTGTGAATGGTGATGATAACAATGGTCACATGATGGGTGATGGGGCATCTGCCTTCCATATTGTAAAGATAATAAGA CCAATAGGCTACATGACTTCTTTTTCTAGTATTGTAGATGATCTTTCAGTCATCTTTGTGGCCTTGAGATCTGATGGAAGGGAAGTAACTGTGACCAATA AGTATCTGAAGGCAAACAATCCACTTCTTCTGATCAATTACTATGAAGAGAATATCCGATACCATCCTATGTAGCTTGACTTAGCAAAGCATTGAAGGAA CTTCTTCTTATAGTTAGATTTTCCTTGTAAGAGCATTGAAGAAGGAATATCTGTTTTAGATTTTCCTGTGTATGTTGTAGACGCAACCAATGGTGAAGGT TAAGGAACTCATTGTGTGCTGGTTATTATGATTAATCGGGTATATTACAATTAAACCAATTGTTTTAAATGCCTTCATGACTATATACTGTGATGCCCAA GTATTTAACTTCATTTGTGTGTATGCAGTTTCACATAATTTTGCCTCTATATACCTTTAGTTCCATGTCATGCTTGTGTGAAGAAGTAGTTGATCATAAA AGCCACGAGCCATGTCCCTAAGAGAGGGTAGGCATATGTTTAATACCTTTAAACCAAGGGCGACTCTGTGATACACCCCAGACTCCTTCAAGTGGCTTAA AAAAGTAGTCAGTTATTTTTTTTGAACTTAGTGATATGTACCTTGCTCACAACTATTCAACATTTCAAAGCTCCTCCTCACAATGAATATTGAACTCGTC ATCAGCGTGTTGAGTTTACATTGAACTATTCAACATTTTTCAAGCGATTTAGATTTGCTGCAGTTCTTCCGGTACATGTATGGTGTTTCCATTATTATGC ATTGAAAACAATGAACAATGTGAACTACAACAACCTCGGGTACACACCTATTAGCATTGTTGAGTTTTGATGTGTCTTCTCCATCTCCTGTCACAATTGG TGATTGTAGCTTCTTCACACCCAAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30423; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240706
| Blastp | Chromo domain protein LHP1 from Lycopersicon with 37.38% of identity |
|---|---|
| Blastx | Chromo domain protein LHP1 from Lycopersicon with 36.76% of identity |
| Eggnog | chromobox homolog(ENOG4111JKD) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438254.1) |
| Pfam | Chromo (CHRromatin Organisation MOdifier) domain (PF00385.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |