Id Trinity | FTRINITY_DN53069_c4_g1_i1 |
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Name Transcript | Ll_transcript_240815 |
Sequence | TTTAAAGCAAAGTGCATATTAGTACACTACTCTTTGAGGAGAAAACAAACACTTGTGTGTATGCTACCTCTTTTCTTCTCTTTCAAAAAATTCAAAGAAT AAAAGAGAGTGAGATTATATTTCACTAAAGATTATTGAACCAATGGAAGAGGGAAGGGTAGTGATGAGTGAGTACACACAAGATGGAAGTGTGGATCTTA AAGGGAAACCAATTCTCAAATCCAAAAGAGGTGGTTGGAAAGCTTGTTCCTTTCTTGTTGTATATGAGATATTTGAAAGAATGGCATATTATGGGATATC ATCAAATTTGATCCTATATTTGACAAAGAAGCTTCACCAAGGTACAATCACTTCATCAAACAACGTCACAAATTGGGCTGGTACAATTTGGTTAACTCCC ATAATAGGTGCTTATGTTGCTGATGCTCACCTCGGCCGCTATTGGACTTTTGTTGTTGCCTCCATCATTTATCTATTGGGTATGTTTCTACTCACATTAT CAGTTTCCCTTCCCAGCCTAAAACCACCTCAATGCCTTGAAGCTGATATAACAAAGTGCAAAAAAGCCTCCACACTTCATCTAGCTGTGTTCTATGGTGC ACTTTACACTCTAGCAGTAGGAACAGGTGGAACCAAGCCCAATATTTCAACCATTGGCGCTGACCAGTTTGATGATTTTGACCCCAAAGAAAAGAGCCAC AAACTCTCATTCTTCAATTGGTGGTTTTTCAGCATCTTTATTGGGACACTTTTTGCAAACACTGTTCTTGTCTATATTCAAGATAATGTAGGGTGGACTC TAGGCTATGCTCTTCCAACTCTAGGCCTTGCAATCTCAATCATCATATTCTTAGTAGGGACACCCTTTTATAGACACAAAGTTCCCACAGGGAGTCCCTT TACTAAAATGGCTCAGGTCATAGTTGCAGCTTTGAGGAAATGGAAGGTGCCTGTTCCTACTGATTCTAAGGAACTATATGAGCTTGAGTTAGAAGAGTAT GCAAAGAAAGGGAAATTCAGAATTGACTCAACTCCGACCTTGAGGTTCCTTAGCAAAGCCAGTGTGAATGCTGGTTCAAGTAGTACATGGATGCTATGTC CAGTTACTCAAGTAGAAGAAACTAAACAAATGCTAAGGATGATACCCATTTTGGTTGCTACACTTGTTCCTAGTACAATGGTTGCTCAAATAAGCACCCT TTTTGTGAAGCAAGGAGCTACACTTGATAGAAGCATTGGAAGGTTCAATATTCCCCCAGCAAGTTTAGGTGCATTTGTAACTCTATCCATGCTTATCAGT GTTGTACTCTATGACAGTTTCTTTGTGAAGATTATGCAAAGATTGACCAAGAACCCCAGAGGGGTTACCCTTATTCAAAGAATGGGAATTGGTCTCATAT TCCACATAGTGATAATGATAATTGCATCTTTCACTGAAAGGTATAGGCTTAGTGTGGCCAAAGAACATGGGGTAGTAGAAAATGGAGGACTAGTCCCTTT GAGCATATTCATTTTGCTTCCACAATATATACTTATGGGAACTGCTGATGCATTTGTAGAGGTTGCAAAAGTTGAATTCTTCTATGACCAAGCCCCAGAA AGCATGAAGAGCCTAGGGACTTCATATTCAATGACTACATTAGGCATTGGGAACTTTTTAAGCACTTTTCTGCTCTCAACAGTTTCACACATCACTATGG AACATGGTCATCAAGGGTGGATTTTGAACAACCTGAATGCTTCTCATATTGATTACTACTATGCACTTTTGGCAATACTTAACTTCCTAAACTTCATTTT CTTCATGTTTGTTACAAAGTTCTATGTATACAAGGCTGAAGTTTCAGATTCCATACAAGTGCTTGAACAAGAACTAAAGGAGAAGACAGCTATTGTGTCA AACCAAGTAATTCCAAGGGACTAGTTTATTGGAGGAATTGGATAGTGTGAGCAATTTGTCTTACCCTGTTCAGTTTTTGAGAAATCTCATGCATCTTGAA AGAAGAACAAGGTTAGAATAAGAAATATAGTTTAATGAACATGTATTTTTTAAGCTAAAGTATTCAACTATTGTGTTAAGGTTCATGTAAGGAAAATGTG GAAATTAAATATGCAAGTTACTTTATTGGTGTTCATGTAAAAGATGTCCCAAAAAATAGGAAAAAAGTAGAAGCAAAAATGTACAAGGTTAGGTGTTGTT TTGGTAGGGACTAGGGGTCACAGGGTTAACATCCAAATGAAAATAATTGAATTACCACATACAATAAAAATGGTTAATTAGAGCCACA BLAST |
Tissue | flowers |
Gene name | LI_gene_30482; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240815
Blastp | Protein NRT1/ PTR FAMILY 5.2 from Arabidopsis with 69.1% of identity |
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Blastx | Protein NRT1/ PTR FAMILY 5.2 from Arabidopsis with 69.1% of identity |
Eggnog | transporter(COG3104) |
Kegg | Link to kegg annotations (AT5G46050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449956.1) |
Pfam | POT family (PF00854.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |