Id Trinity | FTRINITY_DN53071_c3_g3_i16 |
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Name Transcript | Ll_transcript_242166 |
Sequence | TGATTACTAAAAAATAGTTTTATAATGAATACGTCCCCACCCACCATGGTTATACCTTGGTCATAGATTCCCAAACTCTGGTTCATAATTCATACTCATC CATTAAAATGCCAGGGCTAACCGCACCATCAGATTATTCTAGAGAACCACCTCGCCACCCTCTTCAGAAAATTAACTCTAAACAACCCTTCAATTCTGAA CCACCACGTTCCGCTTTAATCGCTTCTTATCTCACTCCTTCTCATTTCTTCTATAAAAGGAATCATGGCCCTATCCCCATCCTTCAAAACATTCACAGGT ACTGTGTGTCAATATCTGGGTTGGTGGAAAATCCCAAAGAGCTTTTTATGAAAGATATAAGGGCGCTTCCAAAGTATAATGTCACTGCTACACTACAGTG TGCAGGTAATAGAAGAACTGCGATGAGCAAGACCAGACCTGTAAAGGGGGTTGGCTGGGATGTTTCGGCTATTGGAAATGCTGTTTGGGGTGGTGCCAAA TTGAGTGATGTTCTTGAACTTGTTGGAATTCCAAATTTGACTAGTAAAACTCAACTCGGTGGAAAGCATGTTGAGTTTGTAAGTGTTGATAAGTGTAAGG AGGAAAACGGAGGCCCTTATAAAGCATCAATTCCCCTTAGTCAGGCCACCAATCCTGAAGCTGATGTTCTACTTGCTTATGAAATGAATGGAGAACCTCT TAACAGGGACCATGGGTATCCGTTACGTGTGGTTGTTCCTGGTGTCATTGGAGCCCGATCTGTTAAATGGCTTGAAGCTATCAATATCATTGCAGAAGAA TGCCAGGGTTTCTTCATGCAAAAGGACTACAAAATGTTTCCACCATCAGTGAATTGGGATAATATTGATTGGTCAACAAGAAGACCCCAAATGGATTTCC CGGTTCAGTGTGTTATATGCTCTTTAGAAGATGTGAACACAATGAAGCCTGGGAAGGTAAAAATTACCGGATATGCAGCTTCAGGTGGCGGCAGAGGAAT TGAAAGAGTAGATGTGTCTGTTGATGGAGGCAAAACTTGGATGGAAGCATCAAGGTTTCAGAAAAGTGGCACTCCTTATGTAGCAGATGGTCCCAGCAGT GACAAATGGGCATGGGTGCTGTTTGAGGTCACAGCTGATATTCTTCACAGCACCGAAATTATTGCAAAAGCGGTACGTCACAATATATTCCAATAGCCAT GATTCTAGTTTATTTTCTTTGGAAACCAGTTACAGATCCGGTTGAGCAAATCAATTCTGGTGACTAGCACATTAGCAAGAGAATAGATAGAGTGCCTTGA TCCTTGAGTGCCTTGTAGATCACATAAGAAACGAAAGCATTTAACATTCCGAGGATATGAAATTGACATGTTATGGATCTCAAATTATTTAATCCTCGAG TTTTGAGAACCAGATGCATGAAATGAATTCGAGTAAAAGGTTGAGTTTGGAACTTATAGAGACGCGGACGAGTTGTTATAGAAACCGAACTCCAGGACTA ACAAACAGTTGAGCTGAATAAATATCATGTTTTCAATCAATTATTGGCAGGTATGATACATGGAAAATTTAATTATTAGAATTCATCTTCTTTCCTTTTG TTATGATAAAGAATGATAAGAAATGTAATATTCTTTTATAAGTGCCATATGCTCAATCTTTGAAATATCTTAGTCTTAATTTCAGTTCTTGATATAAATT AGATTGATTACCATATCCTTTTAAGGTTTATGCTTCAAAGCTCAAATCTCTTATTCATTAGATATAGACATTCTTACTTTCTCCACTTTCACCACCTTGG AAGGTATAAAAACAAGTGTCACCTTCACTCACTTTTAGTACCTCTTGAGTGGTGTTATAATTACTTCCCCTCAAACAACCAACAAAATGTTGGGCAATTT TCATGCAATATTTTGTTTGCTAAAGCCTGAAACAACCTCTTCGTTTGTGAGCGTAAGACTGCATATACTGAACTGGGAGCCTCGTGCACTGAGCTGTACT AAGATATGCCTAATAATAGTATAATACCTTTGGCTAAAATGCAGGTAGATTCAGCTGCAAATGTACAACCTGAAAAGGTGGAAGATATATGGAACCTGAG AGGGATATTAAACACTTCATGGCATAGGGTACAAGTTCAAGCAAGTCAATCAAACTTGTAAAAGTTGCACCAACACTATTTCTCTTGAGATTATTAGCAT GTGAGGGATTTTAATGAAGAGGAAGGGATTATATAAGATCAAATAATTTCCTTGTTTATGTTTGGTTTAATAATGTGTTGTGGAAGGAAAATAAGATTTA TTTCTCCACTCCTTGTATGATAGTACTCACTCACCCAACACTTGTTCATTTTGGAATTTATGTGCTAATAACATTCTAAATAATTTACTATGATTGATAT ATTAGTGTAGTGGTGTAAGGTCTTACTGAATCTCATGTATTGTACTAGGTTAAAGGTTAAACGATTAATTCCTAAAAGTGACATTTATTGGTAGGAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_30514; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_242166
Blastp | Sulfite oxidase from Arabidopsis with 76.69% of identity |
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Blastx | Sulfite oxidase from Arabidopsis with 76.69% of identity |
Eggnog | The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase (By similarity)(COG2041) |
Kegg | Link to kegg annotations (AT3G01910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453296.1) |
Pfam | Oxidoreductase molybdopterin binding domain (PF00174.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |