| Id Trinity | FTRINITY_DN53071_c3_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_242143 |
| Sequence | TGATTACTAAAAAATAGTTTTATAATGAATACGTCCCCACCCACCATGGTTATACCTTGGTCATAGATTCCCAAACTCTGGTTCATAATTCATACTCATC CATTAAAATGCCAGGGCTAACCGCACCATCAGATTATTCTAGAGAACCACCTCGCCACCCTCTTCAGAAAATTAACTCTAAACAACCCTTCAATTCTGAA CCACCACGTTCCGCTTTAATCGCTTCTTATCTCACTCCTTCTCATTTCTTCTATAAAAGGAATCATGGCCCTATCCCCATCCTTCAAAACATTCACAGGT ACTGTGTGTCAATATCTGGGTTGGTGGAAAATCCCAAAGAGCTTTTTATGAAAGATATAAGGGCGCTTCCAAAGTATAATGTCACTGCTACACTACAGTG TGCAGGTAATAGAAGAACTGCGATGAGCAAGACCAGACCTGTAAAGGGGGTTGGCTGGGATGTTTCGGCTATTGGAAATGCTGTTTGGGGTGGTGCCAAA TTGAGTGATGTTCTTGAACTTGTTGGAATTCCAAATTTGACTAGTAAAACTCAACTCGGTGGAAAGCATGTTGAGTTTGTAAGTGTTGATAAGTGTAAGG TACTGACTCTGACGTGTCTGCTTACGCTAGAGATCATGGATTCTTTCTGGTAATCTATTGCATTCGTCGAAGCTATTCCGTTGATTCCTTATAATCTCGA ACAACTGTAGGAGGAAAACGGAGGCCCTTATAAAGCATCAATTCCCCTTAGTCAGGCCACCAATCCTGAAGCTGATGTTCTACTTGCTTATGAAATGAAT GGAGAAGTAAGTGGATTTGACTTGTTATTGTTGCCAATCTTTTTGCAGCACTAATTTTTCAAGGTTCTTCTATCTTGATTTTCATTTCATTCTAAAAGAA ACCAATAACAAAAATTATGCTAGTTTCATATTTTTAGCAGTGAAGCTGCAGGTATCATTATTTAAATTGGTAAAAAGTTTGGTTCTCTTATGTTGTGTTT TGGTCATTGTAAGTTTTGTTTCTATATTTACACAACACAAACATCAAGAAAAACTGCCCAAGTCTGCAGCAGATAATTTATACTAATTATATTAACTCTA TCGTAATTCCGACATAATACTGAAAAGATGGATTTTGAATCAGAAACTGGAAGAAAGTATACAAGAATAAGCACCATAAAGGGCCATAATGTTCCATCTG GAACATATGAGGGAAACGGTTAGTTTTGAAATTATAAGGTTCAGGTGGAAAAGGGGTCAAAGAGAGAAAGGAGGACCCTAATAATATGATATTTGAATGA GATGTATAATAATAGAAATCACTGACACCTTTTTCAACTAATAGTCAAGTCTAGAATTAGTGTAATACTTGCTACTACTAGTACAAGCTCAATCCGATAT GACTAATGTACTAACCTATTAAGGCTCCTAAAGCAATAAGAATTATAGTATTCTAACACCTTTCCTTAAGTGAAAGCTTAATAAACTTGTTACTAAGCTG TGATGAAAAGGGAGGTGTCATAGGGTTCAGGCCGAAAGGGAGGAAAAGAGAGGAAGGGGTATTTCGAATAATATGATATTAGATTGATATGTGATGTGTT ATAATACGAGTCACTGAAACCTATTTTTCAAATAATTAGGTCAAGTTTCCGGGTACTCTAATGCAATGCCTATATTAAGTACTAAAGTAGTACTTAACCT AATTATTTGCATAGATAGGTGTTAGTTCTTTGTATTGTAATACATCTCATATCAATCAAATGTCATGCATTGGCAACACTGAGTTTTCAACCAACCATAA ACACTTTTAACAGTTCTAAAAAAATTCCTGTTATACTTTCAGTGGAAATGTACAATTTGAATGGTTTAGTTTTTTGGCTTCATATGGTGATATTTGCAGT GAAGTATATTATTCTGGTGTTATGGTGTTCTCGGCTCAGTTTTATATCTTGTTGCCTTCCTTTAGCCTCTTAACAGGGACCATGGGTATCCGTTACGTGT GGTTGTTCCTGGTGTCATTGGAGCCCGATCTGTTAAATGGCTTGAAGCTATCAATATCATTGCAGAAGAATGCCAGGGTTTCTTCATGCAAAAGGACTAC AAAATGTTTCCACCATCAGTGAATTGGGACAACATTAATTGGTCAACCAGGAGACCTCAAATGGATTTCCCTGTACAGTGTGTTATATGTTCTCTTGATG ATGTGAGCATAATAAAGCCTGGGAAGGTAAAAATTAGTGGATATGCAGCATCAGGTGGTGGTAGAGGCATTGAGAGAGTAGATGTGTCAATTGATGGAGG GAAGAGTTGGATAGAAGCCTCAAGGTTTCAGAAAAGTGGTATTCCTTACATAACAGATGATGACAATAGTGACAAATGGGCATGGGTTTTATTTGAGGTC ACTGCTGATATTCTTCACAGCACTGAGGTTATTGCAAAAGCGGTAGATTCAGCAGCAAATATCCAACCTGAAAAGGTTGAAGATATTTGGAACTTGAGGG GAATATTGAACACTTCATGGCATCGGGTACAAGTTCAAGTGGCTCACTAAAATTCTTAAAAGTGTTGTTCAATACTGAGCAATTTGATCGAAAGTCGAAG AACCAGCTTGGATGAATGACTATGTTATTTAGGATTATGAAGTCAATACATTCAATGACTTCGAATTTAGCGACTTCACATGATTCTGACAATTCTGAGT TATTGAATGAAAATAGGACTACTTAAATGAAAATTGTGGTATAGACAAGATTTTTATATACCCTATTATAACGAGGGTACCATGCTTATGTGTATGTAAT AAACTACCCTTGCATGAAAGTATTGATTTTTTGTAAAAATCTTTGTTGTTAGAGTAAGCCAATAAACGTAACTAATATTATAAATATTTAATTGAAAGAA ACTTTAAACGATTAAATCTACTTTTTACTTTATTTATACTAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_30514; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_242143
| Blastp | Sulfite oxidase from Arabidopsis with 73.38% of identity |
|---|---|
| Blastx | Sulfite oxidase from Arabidopsis with 75.9% of identity |
| Eggnog | The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase (By similarity)(COG2041) |
| Kegg | Link to kegg annotations (AT3G01910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458754.1) |
| Pfam | Mo-co oxidoreductase dimerisation domain (PF03404.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |