| Id Trinity | FTRINITY_DN53073_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_242969 |
| Sequence | CATGGATTGTATTAGTTTCTTTGCAATACAATTGACTTATACAAAAAAAAACGGCCCTTATTCCCTTAAACAAACATCAAACCTTATAACGGGTATAACG ACAGCGAGTGAGGGAGAATGAACTCATTGAATTTGAGATTGAAACCCTTAGCCACCATGAAGAGAAAAAGAACAACCAAAAAACCGGTTGCGCCACCTTC CTCCACCCCTCCAGCACCACCAACACAACCCAAAACCCTCCTCAAAACCTGCCACTCCACACCAAAACCACCAAGCACCTTCACCAAATCCCTAAAATTT CCAGAACCTTCTTCCCTTAACGTGTGGATCCCACTCAATCTCACTCGCGAAGAGCTCTCCTTACCGTTAACCTTCCCAACCGGTCAAACCTTCCGCTGGA AAAACACCGCTCCTTCTCAATTCACCGGCGTCGTTGGGTCCCACATCGTATCCCTAACCCACCTCCAAAACGGCGACGTTTCATATTGCCTTCACAGAAC TCACGATGCCGTTGCCGCCAGAACGGCCCTGCTCGATTTTCTCAACGCCGGCGTGTCTCTTGCCGGAATCTGGAAGGTGTTCTCGGACTCCGACGAGAGG TTTGCTGAGCTGGCAAGGCATTTGGGTGGGGCCCGCGTTCTGAGGCAGGAACCGTTTGAGTGTTTGATTCAGTTTTTGTGTTCTTCGAATAACAACATTG GGAGGATTACGAAGATGGTGGATTATGTTTCGTCTATTGGGAATTACTTAGGCTCTGTTGAAGGTTTTATGTTCCATTCTTTCCCTACTTTGGAGCAGCT TTCTTTGGTTTCAGAGGAAGATCTTAGAAAAGCTGGTTTTGGTTATAGGGCTAAGTATATAATTGGCACGGTGAATGCTTTACAATCAAAACCTGGTGGA GGGGAAGAATGGCTTCGGTCCCTGCGCAAATTGGATCTTGAAGATGTTACATCTGCCCTTTCTACTTTACCTGGAGTAGGTCCTAAAGTGGCTGCTTGCA TAGCTCTCTTCTCGCTTGATCAGCATCATGCCATTCCTGTTGACACACATGTGTGGCAGATTGCCACGAAGTATCTCTTACCTGAGCTTGCAGGTTCCCG ATTGACACCGAAGCTCTGTAATCGTGTTGCAGAGGCATTTGTAACCAAGTATGGTAAATATGCTGGCTGGGCTCAAACTCTACTCTTCATAGCTGAATTA CCTTCACAAAAGGTCCTCCTACCTTCACATTTGTGTACAATTGATCAGCACAATCACACAAAGAAAGAAGACAGTGAAATACTTGGTTAGAAAATCAACT GTGGTATTCCAATTTTGATCTTATAAACTAGGCATTCAACATCCAGCATTCTGGCTTCACCAACATCAGATATTAAAATCTTTACTGATCATTTTCTCAA CTATAGCGAATTCTACTGACGGCATGGACCTCCGGATATAGATGCACAAGACTTAGGTGAGACGAGCAGCTGTCAAGACTTATGAGATAGAACATGGTGA GATCACATTGCTAGATCGAGAATGACGCCTAAGCTGTTTAAGCAACACCTAACAGCTGGTATCAAAATATTTACCTTTCATTTTCTCAACTACAGTGAGA TCTACATCTGGTGTTCTCCAAAAGATCTAGAGTGATATCTCTAAATGGAGGATGATATCTAAACTGTGGATGAGGGTTTTGCTGCAGTTCATCACAAACA TGCCCTTTGATTCTATACATGTAAATGAACATGTTCTATGTTGAAAACGTTTTTTGTCCACTGAATGTTGATTTGCACATTTATGTTGTGATTGGCTAAA GCTTCCTAATGGTGGATGATTGGAAGATATACATGCCAAATGGTCAAAGCATCTTTTTGGAGCCTATCTTTTAAATTAAAGGATTATAATTATATCTTTC TTTTTGTGTACGATTAGGGTTGGAGGAAAATTCACAACACAAAGGTGTGACCAAACTCTTCAGAAATATAAATGAGGAAAATGTTTAATGTTCTTTGCAT TTCCAACGATTATGTTTAATGTTTTTTTTATATATCACAGTCATTTTGCCATAGATTCTTGTTGTCCAATCAAGGTCCCGAATGTTTATGAAACATTAAT CTAAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30539; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_242969
| Blastp | N-glycosylase/DNA lyase OGG1 from Arabidopsis with 64.25% of identity |
|---|---|
| Blastx | N-glycosylase/DNA lyase OGG1 from Arabidopsis with 69.65% of identity |
| Eggnog | Glycosylase(COG0122) |
| Kegg | Link to kegg annotations (AT1G21710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438584.1) |
| Pfam | 8-oxoguanine DNA glycosylase, N-terminal domain (PF07934.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |