| Id Trinity | FTRINITY_DN53075_c5_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_241982 |
| Sequence | ATAACACACCCTTCCCTTAAAATTATGGAGCAATAATCTTGTTGCTGAATATTTTTTTCGCTACTTTGTTTTGGCTAAGCTAAAGCTCTTCCAAAGTGCA GGTTCAATATTGTGACACTAATGGGTCACCTTCTGAATCTACTCCATGTAACATCTTTCTTAACCAAACTAACTTTCTATCACTTCCCCAATTTACTTCA CCACAATACATGTTCTTATCCTCCAAAAGTTTCCAAATTTCAGAAATATCATGCTACCCCATTGGCTTTGCAAGGTAGTGGGGATATAGCAGGTCATGTT GAGAGCCCATTTAAGCATAAGGTAATATGCAGTCTAGGCTCCAATTTTGTTTGTTTTCGAGGATAAAATTGCGTACATCTACCATTTCCGGAATCCGGAC CTCACTGGGTGGAGCCTCGCGGGTTAAGCCATGCTTTGATATTCAGTTTGTTATGATTGAATGCCCCATAATTTTAACATTTTTTGAAGTTTTATACAAT TACTAATGCTTATACTTGGAGTATCAGTATTTGTTTGCTTCAATAACTTGTAAGAAGGAAAGAAAAATGCGAGTTTGTTTTGCATAGCTAGTTATTAAGG TAGTTGAAATGTTGTAAGATAAGCCCCTAACTTATAAGTCCATAAGTTATCTCTATTCTCTAGTAGCTAATCAAATATGGGCATATAAGCTCCTAGCATA TTGAAATAAGCCCTTTACCAAACACCTGAAAGTAGCTTATTTTTTGTCAAATAAGTTAATTGAATAGCTTATAAGTTGTTTGATGGTGTTGCCAAACACA CTCGTAAAGCTTCAACCACTCCCTCTAACAGTCATTTTGTGCTCTCCTCATGAGTGTTTCAAGCAGAATTCAATAACTCTATGGTTGATATGAAGGGAAT GGGGCAGCATTGTTGCATTTTTTAGCATTGTAGGTTGCTCTTTTTTCCATTTTAGGATAGTAGGGGATGCCAAGTTATCTCCCGGATGCATTTTCTTTCC TTTTTACATCAAGGATCAACTGTACTAAAAGTTTAAGTTGCTGGGACTTGGGTGTAGGTTAACAGTAGTTATATAAAAAAGGAAGATTTTCTTTCCTTTG GGCATGAAAGGTCGATAAAGCAAAAGACAATCATGTCTTGTGCTAACATTTTAATTGAATTATGAAGGGCAAGTTTTGCAAGTATCACAATCCTGACTAT TAGGTCATAAAAGCTTCGATACTATGTCAACTACTTTAATGCAACGGTAAGGTTGCTGATTAGTGACCATAATCTTGGAAACAGTCTCCCCACTTGTGGG GTAAGGCTTTGCATATCTACTCTCCCCTGACCCCAGTAGTTGGAAGTCTCGTGCAATGGGTCACCCAATATGTCGAGTACTAGATCTCCTAAAAGCTTAA GCTATTAGATGTGTACATTATATCTAACATGACCTTCTATGCAAAAACCACTTTTGGATTGAGGTGTAGACAAATGATATGCCTCTCATACATTGTGCTG AAACTTAATTTAATTATGAAGAAGCTTTAATGCCACTTCAAAGAACAACCATTCTAGAAACCTAGATTGTCAGGTGCTTCCCAGTAATGATAATTTTTTT CTTCTGGCGTAATGGTTATTGCCATTAATTTCAAAACAAATATGCTTTGGTTGTTTAAAACTGAAGTTCTACCATTTCGTTTTAGTTTTGCTCTTAAATT GTAAAAATCAAGTCTTAGTAGATAAAATCAGAGGTCATTGGTATCTCTATTAGCTAATCAAATATGGGCATATAAGCTCCTAGCATATTGTAATAAGCTC TTAAATTGTAAAAATCAAGTCTTATGTAAAATATTTTAGCCTAATCTTGCTCTTCGTATTCTTACATGATATAGAGTGATAAGTACAATTATTGGTTGTA GATTTTGTTGTGGCTCTAAATATTATGGTTTTACTCTTAGATTTACATTAATAATGGAGGAGAGTTGAATGGTATTCCTCATATACAAACTCTTAGAGAA TTTCCCAGGGCGGAGCTTTTTGAAAAGGTAGTCATGGTCCGATTTGATTCTAACATATTGCTCAAGCAAGAGTCTAACCAGACGACTCCGTCAGGTTTTA ATGCACTTTTTACGATTAAATATTTATATGAAGCTGGAGCAAAGGTAATCCTTGTAAGTGACTGGAATAGAAATGGTTCAGAGCTTCACACAGAGTCAGT TGCAGATTTCTTATCAGAAATTCTCCAAATACAAGTTGTTCCAATGCAAGGCATTTCTTGTAACAAGCTAAAAAACGTGAAAGACCACATTAAAGAGAAT ATCCATCTTCTGGAGAATCTTTCTTATTTTAAAGACGAAGTTTCCAATTGCTTGGAGTTTGCTAGAGTATTATCGTCGGGAGTCGATATCTTTGTCAACG ACTCCTTCTCCAACTCTCATAAAGTTCTAGCATCAACGGTTGGTGTTACCCGCTTCTGCTATGCCTGTATAGCTGGTTTTCACTTTGAGGAGAGGCTCTG TCTACTGAAGAATGTCGGAGAAGCCAGCAAGAAACCATATGTTGCAATTATTGGTGGGGGTAATCTCTATGATAAAGCAGCATCTTTTCATTTTTTAGCA TCCAAGTGCGAGGGTTTCTTGTTTGTTGGAATGATATCATTTCAAATAATGTATGCATTAGGAGTATCAGTTCCTCTTAATTTGGTGGACCGAAAGGCAC TTGATGAAGCTCTAGACATAGTGAGACTTGCTCAAGATACAAATGTACAAATTTTGTATCCAAAAGATTTTTGGTGCCGGAATAAACAGAATCCATCACA ACTGCAAGTATTTCCTTCTCATGGAATTTCTGATGGTTGGGTGCCTGTTGACCTTGGACCGGTATCATTGGATGAAATAAGTTCCTTTCTTACAAATTGT AAGAAAATCATGTGGATTGGTCCAGTGAAATTTGTTGATTCAAGTAAATACACAAATGGGGCATCTAGATTGGCAGAAGTTCTTGATCAGCTAAGCCAAA GTAACTGTGAAATAACTGCAGTTGGAACTACGGCATGCCAACTAATGAGGCAGAAAAAAAGTTCATTATCCTTTATAAGTATGATTGAGAATGCTACAGT TGTCTGGGAATTTCTTAAAGGAAGAAAACTGCCCGGTGTTATGGCAGTAGACAGGGCATATCCTTTTGAAATCAAGTGGAATGATGTTTATTCTGATCCA GCTCAACCTCTTGTTGTTGATATCGGAAGTGGTAATGGGCTTTTTCTCCTCGAAATGGCTAGAAGGAAGCGAGATTTGAACTTCCTTGGTTTGGAGATTA ATGAAAAGCTTGTTTTGCGTTGTCTGGATTCGACTCATCAATATGGCCTTAAGAATGGGTATTTTATTGCTACTAATGCAACATCAACATTTCGTTCCAT CGTTTCTTCTAACCCAGGAGAGTTAGTTCTTGTCTCAATACAGTGTCCAAACCCCGATTTCAATAAACCTGGGCATAGATGGAGAATGCTGCAGAGGTCT TTAATTGAAGCCATAGTGGATCTTCTAGCATCTGATGGGAAGGTCTTTCTGCAATCTGATGTAGAAGCTGTAGCAATAAGCATGAAAGAACAATTTCTCA GATATGGCAAGGGTAAGCTTGATTTGGTGCATGGCCAAAATGAGTGGCTTGAGGAAAACCCTTTTGGAGTTAGATCAGACTGGGAAAAACATGTTTTAGA GCGCGGGGCCCCGATGTATCGAATGATGTTTTCTAAATCATCTGATATTAGTGAAGTTTCAGCTGCAAATGATGTAATCCAAAAAGATGATTAATCCATG AAACCCCTCCAAGGGATTGCTGCTTTTGCAGAATCTTTCTATCACAGAGCTAATGGTTTCTCCCTGTCAGGCAATGTTGCAGGTACACTGTTTTTTCATG AATTTTATCTTATTATGACATGGATAAATTATGAAATAATAAGAGGCTGAGTCTCGGCACAACAGTAAGATTGTTTGTCTTGTGACCTGGAGGTCATCGG TTCAAATCCTGGAAATAGTCTCCTCACTTGTGAAGGTAAGGTTGCGTGTATCTCCCTCTCCATATCTTACTAGGTGAGAATCTCGTGTACTAGACCGCCC TTATATATGAACTCCGAACTATTGATCTTGTGCAGGGTTCAAATTCCTAACATTTGGAATTATGTGAAGAGTTGTTAATGAGCATAATCAGATATTCAAC AAGAGAATCTGATCAAGGATGTCCAAAAGCTAGCATTGTGTAACTTTATATTGAAGTTATACAAGGCATAGAAAATCATAATTTCAAATACATGACATTT TGTCATTTCATGCATATATACACATCTCACTTGGTGAATGGTACAAAATTTGTGTAGGGAATGCAAAAAAGCCTAAATCTAACATTTTTTAGTTGACAAC CAAACCAACTTTTCTTCTAGTGTGAATTTCATATTTGAATTTTACACAGAAAACACCAAATTATCACTTGCGCGGGAACTAACATCAATAAGATTTTGAC AACACATTGATCATGGTTTCACCAATCTCAGTATGTGCAATAAGAGGTGGTGTGTATCATTGTGGCAAACCATACATTTAGTGTCAAGATTGGACTATCA TATTCTGACAATACTATGTCACTTCTTGAGTATATCTTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_30558; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_241982
| Blastp | Phosphoglycerate kinase from Synechococcus with 32.29% of identity |
|---|---|
| Blastx | Phosphoglycerate kinase from Synechococcus with 32.5% of identity |
| Eggnog | phosphoglycerate kinase(COG0126) |
| Kegg | Link to kegg annotations (Synpcc7942_1116) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442814.1) |
| Pfam | Phosphoglycerate kinase (PF00162.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |